KEGG   Acanthamoeba castellanii: ACA1_090250
Entry
ACA1_090250       CDS       T02667                                 
Name
(RefSeq) RNA export 1, putative
  KO
K14298  mRNA export factor
Organism
acan  Acanthamoeba castellanii
Pathway
acan03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    ACA1_090250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acan03019]
    ACA1_090250
   03036 Chromosome and associated proteins [BR:acan03036]
    ACA1_090250
Messenger RNA biogenesis [BR:acan03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     ACA1_090250
Chromosome and associated proteins [BR:acan03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    ACA1_090250
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_EML EIF3I WDR90_beta-prop_4th Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_Vps41 DUF2510 Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 14917278
NCBI-ProteinID: XP_004338740
UniProt: L8GUX3
LinkDB
Position
Unknown
AA seq 335 aa
MMSGGENPNNDSVVGTVPDGISSISWSPKSNIFVATSWDNQVRCWEVTGQGAVPKLSMSH
QQPVLCSTWSKDGMRVFTGGCDGVAKCWTLQTGQAVDIGKHGAPIKTAHYIDELQMLCTG
SWDKTLRYWDGRSPTPAATVNLPERAYCMDVAYPLAVVATAERHVLIYNLSNPAVEYKRI
QSPLRYQSRSLACFPDKKGFALGSIEGRVAIHHVEDADSSKNFAFKCHRDTARDSNAIYA
VNAISFHPGYGTFSTAGSDGTFHFWDKDSKQRLHRFQKMPQPISCTGFNFDGSIFAYACS
YDWSRGTDNYNPATSKNYILLHATKPAEVQGRARS
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgatgagtggaggtgaaaacccaaacaatgatagcgtcgttgggactgtccccgatggg
atttccagcatcagctggagccccaagtccaacatctttgttgccacctcgtgggacaat
caggtgcgctgctgggaggttactggccagggtgccgtgcccaagttgtccatgtcgcat
cagcagccagttctgtgctctacgtggagcaaggacggcatgcgagtgttcacaggaggc
tgcgacggagtggccaagtgctggaccctccagactggccaggcagtggatatcggcaag
cacggcgcaccgatcaagaccgcgcactacatagacgagctccaaatgctctgtaccggt
agctgggacaagaccttgcgctactgggacggaaggtcacccacgcccgcggccactgtg
aacctgcccgagcgtgcctattgcatggacgtggcctatcctcttgccgttgttgccact
gccgagcgtcatgtgctcatctacaatctcagcaaccctgccgtcgagtacaagcgaatc
caatcacctctccgctaccaaagccgaagcttggcctgcttccccgacaaaaagggcttc
gctctcggttcgatcgaaggtcgtgtggccatccaccacgtcgaggatgctgacagcagc
aagaactttgctttcaagtgccaccgcgacaccgcacgtgacagcaatgctatctacgcg
gtgaatgccatttccttccaccctggctacggcactttctccacggccggctctgacggt
acgttccacttctgggacaaggattcgaagcagcgcctccacaggttccagaagatgcca
cagcccatctcctgcacgggcttcaactttgatggctccatcttcgcctacgcgtgctcc
tacgactggagcaggggaacggacaactacaacccggccacgtccaagaactacatcctt
ttgcacgccaccaagcctgccgaagttcagggccgtgcgaggtcgtaa

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