KEGG   Acanthamoeba castellanii: ACA1_098060
Entry
ACA1_098060       CDS       T02667                                 
Name
(RefSeq) ribosomal L40e family
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
acan  Acanthamoeba castellanii
Pathway
acan03010  Ribosome
acan04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    ACA1_098060
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    ACA1_098060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:acan03011]
    ACA1_098060
   04121 Ubiquitin system [BR:acan04121]
    ACA1_098060
Ribosome [BR:acan03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    ACA1_098060
  Archaea
    ACA1_098060
Ubiquitin system [BR:acan04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   ACA1_098060
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD DUF2604 Dsc3_N TBK1_ULD Ubiquitin_5 UBL_UBAC1 OTU1_UBXL RA_2
Other DBs
NCBI-GeneID: 14913229
NCBI-ProteinID: XP_004335122
UniProt: L8GJX8
LinkDB
Position
Unknown
AA seq 128 aa
MQIFVKTLTGKTITLEVESSDTIENVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGVIEPSLQVLARKYNCDKVVCRKCYARLHPRAVNCRKKKCGHSNQ
LRPKKKLK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctcaccggtaagaccatcaccctcgaggtcgagtcgtcc
gacaccatcgagaatgtcaagcagaagatccaggacaaggagggcattcctccggatcag
cagcgtctgattttcgccggcaagcagcttgaggacggccgtaccctcgctgattacaac
atccagaaggagtccaccctccacctggtgctccgtctcaggggtggcgtcattgagccc
tcgctccaggtgttggcccgcaagtacaactgcgacaaggttgtctgccgcaagtgctac
gctcgccttcacccccgcgcggtaaactgccgcaagaagaagtgcggacacagcaaccag
ctgcgccccaagaagaagctgaagtaa

DBGET integrated database retrieval system