Acanthamoeba castellanii: ACA1_109730
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Entry
ACA1_109730 CDS
T02667
Name
(RefSeq) replication factor rfc1 c terminal domain containing protein
KO
K10754
replication factor C subunit 1
Organism
acan
Acanthamoeba castellanii
Pathway
acan03030
DNA replication
acan03410
Base excision repair
acan03420
Nucleotide excision repair
acan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACA1_109730
03410 Base excision repair
ACA1_109730
03420 Nucleotide excision repair
ACA1_109730
03430 Mismatch repair
ACA1_109730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acan03032
]
ACA1_109730
03400 DNA repair and recombination proteins [BR:
acan03400
]
ACA1_109730
DNA replication proteins [BR:
acan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
ACA1_109730
DNA repair and recombination proteins [BR:
acan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
ACA1_109730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA
AAA_lid_RFC1
BRCT
Rad17
AAA_assoc_2
AAA_22
RCF1-5-like_lid
RuvB_N
nSTAND3
PTCB-BRCT
AAA_16
DNAX_ATPase_lid
AAA_14
AAA_33
LRV_2
RNA_helicase
AAA_7
AAA_5
AAA_19
Sigma54_activ_2
AAA_18
Motif
Other DBs
NCBI-GeneID:
14926030
NCBI-ProteinID:
XP_004357147
UniProt:
L8HIF4
LinkDB
All DBs
Position
Unknown
AA seq
977 aa
AA seq
DB search
MTTIFEAPVKKGVKRGREPAAKKETTTATKAREPPAKKVKKAAEELPWPDIVQEGTEDEP
TPKAKAKTKASAASTRPTLRAKRRPTEAVKEEEEEEVEAQPKRSTPTKKKAKKAHTKQQE
EVAAADDIPWDDDVEDVDDIPWDQPTTTATTPTKKAATARTTRGETPGESPGKKSKAAAA
AAKPEPKSPVKKVKPSEAKSPAKSPAKSTTTTVIERKTPVVEKKVVEAKPAPAKRGGGGG
GYPFWMQNRAGPPHLGMKDLPEGKPWCLWGKVFMCTGVLDSLERDDCFTLIEHYGGTVAK
SVTKKLTHAVVGTDAGAKKLEQIEARKAQGLVALDEDGLFDLIRNSPEHRPSAAEIAKFN
KQRKTEGAPAKPKALQTAAPLLPSPTPASAEEEQKKGPELWVEKYKPKSTKEVIANPAAV
KKLQDWLQGWQRSEVQRAKRGEAPARGATQKNAALLSGPPGIGKTTTAHLVAAECGYYAL
EFNASDTRSKKMIKEHLAQSTENRGLAEFFTGRGGEDGKTVLIMDEVDGMSSGDRGGMAE
IIALIKKTHIPIICLCNDRASAKVRSLANYCLDIQLQKPTTQQILGRVTQILQRENIAID
NATLTRIVDASNGDVRQLLNMLQMLTVKSKDLGTLSAPELQERLRTSLKEVELGPLDAVN
KLFNATEYQKLSLDAKLDLYFIDPSFVPLFIQENYLHCRPRRARNVSRNPEVERLVEMDL
ISQAADSFSEADLFDVAIHRDQDWSLAPIHGVFSAIRPAEFMTGNLAGRIDFPKWLGKFS
SRKKRFRLLTELAVRMSATTSGDKALLRLDYLPHLVRPLTAPLAKKGADGIDEVLALMDA
YGITREDWDTVLELMELGDKDWAKSIPTNVKTAFTRKYKAAHLAVKSAPARKGTVNYVLP
EEAAAQGRDGDDEGDDAFNDDEAGEGEGDEGDSMIVARASKKGAAKGAKGGAKKPAARGG
AAGRGRGRGETAKAKAK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgattttcgaagctccagtgaagaagggcgtgaaaagaggacgtgagccagcg
gcgaagaaggagacaacaacagcaaccaaggctcgcgaaccgccggcaaagaaggtcaag
aaggccgctgaggagctgccgtggcccgacatcgtgcaggaaggtactgaagacgaaccc
acgcccaaggccaaggccaagaccaaggccagcgccgccagcacgcgccccactctgcgg
gccaagcggcggccaacggaagcggtgaaagaggaagaagaggaggaggtggaggcacag
ccgaagcggagcacgccgaccaagaagaaggcgaagaaggcgcacaccaagcagcaggag
gaggtggcggcggcggacgacatcccgtgggacgacgacgtggaggacgtggacgacatc
ccgtgggaccagcccaccaccaccgccactacgcccaccaagaaggccgccaccgcgagg
acgacgagaggcgagactcccggcgagagtccgggcaagaagagcaaagcggcggcggcg
gcagcgaagcccgagccgaagagtcccgtaaagaaggtgaagccgtccgaggccaagagc
cccgccaagagcccggccaagtcgaccaccacgaccgtgatcgagaggaagacccctgtc
gtcgagaagaaggtcgtcgaagccaaacccgcgcccgccaagagaggcggcggtggcggc
ggctatccgttctggatgcagaatagggccggtccgccgcacctgggcatgaaggacttg
cccgagggcaagccgtggtgcctgtggggcaaggtgttcatgtgcaccggcgtgctggac
tcgctcgagcgcgatgactgtttcacgctcatcgagcactacgggggcacggtagctaag
agcgtcaccaagaagctcacccacgctgttgtcggcaccgacgccggagccaagaagctc
gagcagattgaggcgcggaaggcgcaggggctcgtcgccctggacgaggatggcctcttc
gacctcatccgcaactcgccggagcataggccgtcagcggcggagatcgccaagttcaac
aagcagcgcaagaccgaaggcgctcccgccaagcccaaggctctccaaaccgccgccccg
ctccttccttcccccacgcccgcttcggccgaagaagagcagaagaagggacccgagttg
tgggtggaaaagtacaagcccaagtcgacgaaggaggtcatcgccaaccccgcggcggtg
aagaagctgcaggactggctgcaggggtggcagcgatcggaggtgcagcgcgccaagcgt
ggagaggcgcccgctcgcggtgccacacagaagaacgccgccctgctcagcggaccgccc
ggcatcggcaagaccacgaccgcccacctggtcgccgccgagtgtggctactacgcgctc
gagttcaacgcctccgacacccgctccaagaagatgatcaaggagcacctggcccagtcg
accgaaaacagaggcctggccgaattcttcaccggtcgtggaggggaagacgggaagacg
gtgctgatcatggacgaggtggacggcatgtcgtccggcgacagaggaggcatggccgag
atcatcgccctcatcaagaagacccacattcccatcatctgcctgtgcaacgaccgcgcc
tcggcgaaagtccgctccctggcgaactactgcctggacatccagctccagaagcccacc
acccagcagatcctgggccgcgtgacgcagatcctgcagcgcgagaacatcgccatcgac
aacgccacactcacccgcatcgtcgacgcatcgaacggcgatgtgcgtcagctgctgaac
atgctgcagatgctcacggtcaagtccaaggacctcggcaccctctccgcgcccgaactg
caggagaggctgcgcacgagcctcaaggaggtggagctgggtccgctcgacgccgtgaac
aagctcttcaacgccacggagtaccagaagctgtcgctcgacgccaagctggacctctac
ttcatcgacccgtcgttcgtgcccctcttcatccaggagaactacctccactgcaggccg
cggcgggcgcgcaatgtgagccgcaacccggaggtggagcggctggtggagatggatctg
atctcgcaggcggccgactccttctcggaggccgacctgttcgacgtggccatccaccgc
gaccaggactggtcgctggcgcccatccacggcgtgttctcggccatccgacctgccgag
ttcatgacgggcaacctggcgggccgcatcgacttccccaagtggctgggcaagttctcg
tcgcgcaagaagcggttccgtctgctcaccgagctcgccgtgcgcatgagcgccaccacc
tcgggcgacaaggccctgctccgcctcgactacctcccgcacctcgtgcggcctctcacg
gccccgctcgcgaagaagggcgccgacggcatcgacgaggtgctcgccctcatggacgcc
tacgggatcacccgcgaggactgggacacggtgctcgagctcatggagctgggcgacaag
gactgggccaagtcgatccccaccaacgtcaagaccgccttcacccgcaagtacaaggcc
gcccacctggccgtcaagtcggcccccgcccgcaagggcaccgtcaactacgtcctcccg
gaggaggccgccgcacagggccgcgacggcgacgacgagggcgacgacgccttcaacgac
gatgaggcgggcgagggcgagggtgacgaaggcgacagcatgatcgtggcccgtgcctcc
aagaagggcgcggccaagggagccaagggaggcgccaagaagcccgccgcacgaggaggc
gccgcgggacgagggcgaggccgcggggagacagccaaggccaaggccaagtaa
DBGET
integrated database retrieval system
