Acanthamoeba castellanii: ACA1_115430
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Entry
ACA1_115430 CDS
T02667
Name
(RefSeq) DEAD/DEAH box helicase domain containing protein
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
acan
Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acan03041
]
ACA1_115430
03009 Ribosome biogenesis [BR:
acan03009
]
ACA1_115430
Enzymes [BR:
acan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACA1_115430
Spliceosome [BR:
acan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
ACA1_115430
Ribosome biogenesis [BR:
acan03009
]
Eukaryotic type
Pre-60S particles
Helicases
ACA1_115430
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
14920967
NCBI-ProteinID:
XP_004342233
UniProt:
L8H5X4
LinkDB
All DBs
Position
Unknown
AA seq
762 aa
AA seq
DB search
MSLLPTITDEDNVEIFEEDDDGEDDLMLGPASDEEEEEEADGETPKKGKKKAKKTSKLEF
DFSGDTREGERPWDFSWALQNTLEKNYDEQTSIDYKIRKQLESRRKRGVVDDDIDDEDVE
DEQEGVEQPKKKKNKKNKKKAAKEAEKEEAEEDEEDQEDENEDQIKQVTHKPTKKQIKEA
FFEKSETEGYQAESFLDLHLSRALLKAVANLGYDRPTPVQSQAIPIALQGKDVCASATTG
SGKTASFVLPILERLIHRDKRIMATRVVILTPTRELAIQCHSVIEKLAKFTDITACLVVG
GLSNKVQEAALRRHPDIVVATPGRIIDHLRNAQSFTLETVDILVLDEADRLLSLGFADEL
EQIIKFCPPNRQTLLFSATMTEEVDRLASLSLNRPVRVRLDPNMRVASGIQQEFIKIKEA
REFDRDAMLLALCTRSFKKRVLIFFRAKKEAHRLKVIFGLAGLKAAELHGNLSQNQRLEA
LEKFRDGNFDYLLATDLAARGLDILGIETIINYNMARTVESYIHRVGRTARWGHSGKSVT
FISEQDRKVFKEIMKSTNQKVSNRVIPPKIIDQWREKIDSMKGDISQIFAMEYEEKQLRL
TQMEASKTQNMIEHHDEIMSRPPRTWFQTKEQRDLAKGSFLPLSLSSRAKQAISARQAKK
ADRDRRSGKFVPPPENAGKRGKKRARSDDGGAPAGGGGGGGSRFEADMTQPKKKQKAAGS
AFDGEKGGKGGKSGAADGEKKHLGKKRGNKAFKSKKRFQRRK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctgccgaccattacggatgaagacaacgtcgaaatcttcgaggaggacgat
gatggcgaagatgacttgatgttgggacccgccagtgatgaagaggaggaggaagaggcg
gacggagagactcccaagaagggaaagaagaaggcgaagaagaccagcaagctcgagttc
gacttctccggcgacaccagagagggcgagcggccgtgggacttctcatgggcgctgcag
aacacactcgagaagaactacgacgagcaaacgtcgatcgactacaagatcaggaagcag
ctggagagtaggcgaaagcgaggtgttgtggacgacgacatcgacgacgaggacgtggaa
gacgagcaggagggagtagagcagcccaagaaaaagaagaacaagaagaacaagaagaag
gcggccaaggaagccgaaaaggaggaggctgaagaggatgaagaagatcaagaagacgag
aacgaggatcagatcaagcaggtgacgcacaagccgaccaagaagcaaatcaaggaggca
ttcttcgagaagtctgagaccgagggttaccaagccgagagcttcctggatcttcacttg
tctcgtgccttgttgaaggccgtggccaatctcggctacgaccgacccactcccgtgcag
tcgcaggcgatccccatcgcgctgcagggcaaggacgtgtgcgccagcgccaccaccggc
tccggtaagaccgcctcgttcgtgctgcccatcctcgagcgcctcatccacagggacaag
cgcatcatggccacgcgagtcgtcatcctgacgcccacgcgcgagttggcgattcagtgt
cactccgtgatcgagaagctggccaagttcaccgacatcacggcctgtctggtcgtgggc
ggtctgtcgaacaaggtgcaggaggccgcgctccgcaggcaccccgacatcgtggtggcc
acgcccggtcgtattatcgatcatttgaggaatgcgcagtcgttcaccctggagacggtc
gacattctcgtgctcgacgaagccgatcgactgctgtcgctcggattcgccgacgagctg
gagcagatcatcaagttctgcccccctaaccgtcagacccttctcttctccgccaccatg
accgaagaggtggaccgtctggcctcgctttcgctgaaccggccggtgcgtgtgcgtctg
gacccgaacatgcgggtggccagcggcattcagcaggagttcatcaagatcaaggaggct
cgcgaattcgaccgcgacgccatgctcctcgcgctctgcacgcgttcgttcaagaagcgg
gtgctgatcttcttccgcgccaagaaggaggcccacaggctcaaggtgatcttcggtctc
gccggactcaaggccgccgagttgcacggcaatctttcccagaatcagcgtcttgaggcg
ttggagaagttcagggacggcaacttcgactacctgttggccacagacctcgccgcccgt
ggtctcgacatcctgggtatcgaaacgattatcaactacaacatggcccgcaccgttgag
tcgtacatccaccgcgtgggccgaactgcccgttggggccactccggcaagtcggtcacg
ttcatcagcgagcaggacaggaaggtgttcaaggagatcatgaagagcaccaaccagaag
gtctccaaccgcgtcattccgcccaagatcatcgatcagtggcgagagaagatcgacagc
atgaagggcgacatcagccagatcttcgccatggagtacgaggagaagcagctgcgtttg
acgcagatggaggccagcaagacgcagaacatgatcgagcaccacgacgagatcatgtcc
cgtcccccgcgcacctggttccaaaccaaggagcagcgagacctcgccaagggttcgttt
ctccccctttccctgtcctcccgcgccaagcaggccatctccgcgcgccaggccaagaag
gccgaccgcgaccgtcgcagcggcaagttcgtgccgccgcccgagaacgccggcaagcgc
ggcaagaagcgcgcgcgaagcgacgacggcggcgcgcccgcgggcggcggcggcggtggt
ggttcgcgcttcgaggcggacatgacgcagcccaagaagaagcagaaggcggcagggtcg
gccttcgacggcgagaagggcggcaagggcggcaagagcggggccgccgacggcgagaag
aagcatctgggcaagaagcgcggcaacaaggccttcaagtccaagaagaggttccagcgg
aggaagtga
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integrated database retrieval system
