KEGG   Acanthamoeba castellanii: ACA1_116470
Entry
ACA1_116470       CDS       T02667                                 
Name
(RefSeq) PRP38 premRNA processing factor
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
acan  Acanthamoeba castellanii
Pathway
acan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ACA1_116470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acan03041]
    ACA1_116470
Spliceosome [BR:acan03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    ACA1_116470
SSDB
Motif
Pfam: PRP38 Apis_Csd
Other DBs
NCBI-GeneID: 14921021
NCBI-ProteinID: XP_004342286
UniProt: L8H6U6
LinkDB
Position
Unknown
AA seq 418 aa
MPYGYPQQGYPAAAVGYADPAAMAAYSQQQGYMMQQSYPGMHHMMMMQGVPPVSGAEDEY
EEKEEISEERKQRRKERKETREKKNKLELHGDLEKMNLSALIYNNILGSTYFKGLYKLKT
YHEIVDEIYYSVEHLEPFMPNSKMASQAWCLMYKCFTIKLTKKQVTGMLDHADSPYIRGI
GFLYLRMCTNPKLLWDWFEPYLADEEEITIRYKGKPTTIGSLVEDLLTTIKFVDAIMPRF
PALVGKEINDRLAEWHRKNPGVVRKPTDIASDDSQKGSGQRSRGGGSSSSPQAEIERGRD
HDRDRDRDSRYKRSRSGSRERSRGGSRDRGSRRNDERDRDRKRARTSRSPSRSPSRRSPD
RTATAQKKAPSAEHMAKMRMLAAKYGSSSAAAPAQGERKAPVASSATEKDTMVLGRRY
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgccgtatggctatcctcagcagggataccctgctgctgctgtggggtatgccgatccc
gcagcgatggcggcctacagtcagcagcaagggtacatgatgcagcaatcgtaccctgga
atgcaccacatgatgatgatgcaaggggtaccgccggtctctggtgccgaggatgagtat
gaggagaaggaggagatatccgaggagcggaagcagaggcgaaaggagaggaaggagacc
cgagagaagaaaaacaagttggagctccacggcgatctcgagaagatgaacctctcggca
ttgatctacaacaacattctcggttccacctacttcaaaggcctctacaagctgaagacc
taccacgagatcgtcgacgagatctactactcggttgagcatttagagccttttatgccc
aactcgaagatggcttcgcaggcgtggtgcctcatgtacaaatgcttcaccattaagctg
accaagaagcaggtcaccggcatgctcgatcacgccgactcaccgtatattcgtggcata
ggtttcctgtacctgcgcatgtgcaccaatccgaagctgctgtgggactggttcgagccg
taccttgccgatgaagaggagatcaccatacgatacaagggcaaaccaacaacgattggt
tcccttgtggaggatctgctcaccacgatcaagttcgtggacgccattatgccacgcttc
cccgcgctcgtgggcaaggagatcaacgaccgcttggccgagtggcaccgaaagaacccc
ggcgtcgttcgaaagcccaccgatatcgccagcgacgacagccaaaagggcagcggacag
cgaagccgaggcggcggctccagctccagccctcaagcagagatcgagcgagggcgagac
catgatcgagaccgtgaccgggactcaaggtacaagcggtcgcgctcgggatcgagggag
cgaagtcgaggcgggagcagagatcgagggtcgcgacgcaacgacgagcgagatcgcgac
aggaagcgagcgcgcacgtcgaggtcgcccagccgctcgcccagccggcgatctcccgac
cgtacggcaacggctcagaagaaggcacccagtgctgaacatatggcgaagatgaggatg
ctggcggccaagtacggttcatcgtcggccgcagccccggcgcagggcgagcgcaaggcg
cccgtggcgtcatcggccacggagaaggacacgatggtcctcggcagaaggtactag

DBGET integrated database retrieval system