Acanthamoeba castellanii: ACA1_116470
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Entry
ACA1_116470 CDS
T02667
Name
(RefSeq) PRP38 premRNA processing factor
KO
K12850
pre-mRNA-splicing factor 38B
Organism
acan
Acanthamoeba castellanii
Pathway
acan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACA1_116470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acan03041
]
ACA1_116470
Spliceosome [BR:
acan03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
ACA1_116470
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Apis_Csd
Motif
Other DBs
NCBI-GeneID:
14921021
NCBI-ProteinID:
XP_004342286
UniProt:
L8H6U6
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MPYGYPQQGYPAAAVGYADPAAMAAYSQQQGYMMQQSYPGMHHMMMMQGVPPVSGAEDEY
EEKEEISEERKQRRKERKETREKKNKLELHGDLEKMNLSALIYNNILGSTYFKGLYKLKT
YHEIVDEIYYSVEHLEPFMPNSKMASQAWCLMYKCFTIKLTKKQVTGMLDHADSPYIRGI
GFLYLRMCTNPKLLWDWFEPYLADEEEITIRYKGKPTTIGSLVEDLLTTIKFVDAIMPRF
PALVGKEINDRLAEWHRKNPGVVRKPTDIASDDSQKGSGQRSRGGGSSSSPQAEIERGRD
HDRDRDRDSRYKRSRSGSRERSRGGSRDRGSRRNDERDRDRKRARTSRSPSRSPSRRSPD
RTATAQKKAPSAEHMAKMRMLAAKYGSSSAAAPAQGERKAPVASSATEKDTMVLGRRY
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatggctatcctcagcagggataccctgctgctgctgtggggtatgccgatccc
gcagcgatggcggcctacagtcagcagcaagggtacatgatgcagcaatcgtaccctgga
atgcaccacatgatgatgatgcaaggggtaccgccggtctctggtgccgaggatgagtat
gaggagaaggaggagatatccgaggagcggaagcagaggcgaaaggagaggaaggagacc
cgagagaagaaaaacaagttggagctccacggcgatctcgagaagatgaacctctcggca
ttgatctacaacaacattctcggttccacctacttcaaaggcctctacaagctgaagacc
taccacgagatcgtcgacgagatctactactcggttgagcatttagagccttttatgccc
aactcgaagatggcttcgcaggcgtggtgcctcatgtacaaatgcttcaccattaagctg
accaagaagcaggtcaccggcatgctcgatcacgccgactcaccgtatattcgtggcata
ggtttcctgtacctgcgcatgtgcaccaatccgaagctgctgtgggactggttcgagccg
taccttgccgatgaagaggagatcaccatacgatacaagggcaaaccaacaacgattggt
tcccttgtggaggatctgctcaccacgatcaagttcgtggacgccattatgccacgcttc
cccgcgctcgtgggcaaggagatcaacgaccgcttggccgagtggcaccgaaagaacccc
ggcgtcgttcgaaagcccaccgatatcgccagcgacgacagccaaaagggcagcggacag
cgaagccgaggcggcggctccagctccagccctcaagcagagatcgagcgagggcgagac
catgatcgagaccgtgaccgggactcaaggtacaagcggtcgcgctcgggatcgagggag
cgaagtcgaggcgggagcagagatcgagggtcgcgacgcaacgacgagcgagatcgcgac
aggaagcgagcgcgcacgtcgaggtcgcccagccgctcgcccagccggcgatctcccgac
cgtacggcaacggctcagaagaaggcacccagtgctgaacatatggcgaagatgaggatg
ctggcggccaagtacggttcatcgtcggccgcagccccggcgcagggcgagcgcaaggcg
cccgtggcgtcatcggccacggagaaggacacgatggtcctcggcagaaggtactag
DBGET
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