Acanthamoeba castellanii: ACA1_136310
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Entry
ACA1_136310 CDS
T02667
Name
(RefSeq) hypothetical protein
KO
K14311
nuclear pore complex protein Nup188
Organism
acan
Acanthamoeba castellanii
Pathway
acan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ACA1_136310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_136310
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
ACA1_136310
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup192
Nup188_N
TerB
MitMem_reg
Motif
Other DBs
NCBI-GeneID:
14911824
NCBI-ProteinID:
XP_004333423
UniProt:
L8GE86
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MKSLQAQLLDKNYKRASLEKVRSGKVELGGKVQTINASERDFVAKLSKRLDLDAVEALKI
FRNFMKYEATGRFEYDAETSLREVMRHYYRERQALLKCLSAIFRISMADQDNAPVEEAQQ
RLSDPKNKLDRRMLEQFINLSDEPEARQDQEAWAKNNLEEQSLCLEILFLYFYCREPVFE
PETILSYARYLKKHIAWDKIHPLLGEESRPLMNRICVQCVLILLALFGLETIVEDGDQTP
GRATKALPAETRQLFDKEFEQWARDLNVVPFLSVMTHVFARNDPHVAGYKSVICGEISAA
LTCFDIGAVGEFDHLLQLYHDIFFNETAITLPYLKANFTKKCNALYHISRSSFPHEFDPF
VRLSQTFAADSICAEFMFRQILELKHFTVSRGLVHRVDRDEFIQWNIGNYSGWTYFMGKI
YVLATKLSNRQPTSASEIVQVTLILRLMNQLFAKKDDLIKYLNDHLKGTMGRNTNLLRQL
FTLLRTSSNLASSSPALLEMLDACVRCINHFATSHPLQVWEEMRRGGVLQEMSSSIKGKP
DGDIRQILMLEQRNGLYPITISFLNLLYTLLSYARKWQLPETQTNTMQDEGDMDSVSLED
FHPCLSFVKADLFARYESWRYQKPQQKHKIGIKIMNIFIDILSEDTVKNLTGQTLPMAKT
DMDLSLASPMAKYQPMTPLGCFHFYAGFGLIRALLRRVLAHPRSLATWERKRKHFKTQNL
RVEILRLVEKALRHQPGLALLFINIDANKAKRGGEKDGENVQESHSCLKLVRKMLANSRH
NMSSLPRLFAEVTSLLGSLWRAAPSHQSIIRALRESPDFWKQLTETLSVSIERHLHAYNV
RQAALNPTKAAKSPSGSEKGKERLTDDLDDEPG
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgctgcaggcccaactgctagataagaactacaagcgtgcatcgctggagaag
gttcgctcgggcaaggtggagcttgggggcaaagtccagacaattaatgcaagcgaacgc
gactttgtagccaagttgagcaaacgattggaccttgacgcggtggaggcactcaagatc
ttccgcaacttcatgaagtatgaagcaacaggacgtttcgagtacgatgccgaaacctcc
ctgcgcgaggtcatgcggcactactaccgcgagcggcaagcgctgctcaagtgcctctcg
gccatcttccgcatctccatggcagaccaagataacgcccctgtcgaagaggcacaacag
cggctgagcgatcccaagaacaagctcgaccgtcgcatgctcgagcagtttatcaatctg
tcggacgaacccgaagcgagacaagaccaagaggcctgggcgaagaacaatctcgaagag
cagagtctctgccttgagattctgttcctctacttctactgccgagagcctgtgtttgag
ccagagaccattctcagctacgcgcgctatctcaagaaacacatcgcatgggataaaatc
catccactgctgggcgaggagagccggccgctcatgaacaggatatgcgtccagtgcgta
ttgattttattggcgctgttcggtttggagaccatcgtcgaggatggagatcaaacgccc
ggcagggcgacgaaagcactgcctgccgagacacggcagctgtttgacaaggagttcgag
cagtgggctcgagacctgaacgtggtgccgtttttgagcgtaatgactcacgtgttcgcc
cgcaacgacccacacgttgctggctacaaaagtgtcatctgcggcgaaataagtgctgcc
ttgacgtgcttcgatattggcgccgtaggggagtttgatcacctgcttcagctctaccac
gacatcttcttcaacgaaaccgctatcaccctcccttacttgaaggccaacttcacaaag
aagtgcaacgctctctaccacatctcgcgatcaagcttccctcacgagttcgatcccttc
gttcgactgagccaaacgtttgctgcggactccatctgcgccgagttcatgttccgccag
atcttggaactgaagcacttcaccgtgtctcgaggcctcgtacaccgtgttgatagagat
gagttcatacagtggaacattggcaactattctgggtggacctacttcatgggcaagatc
tacgtactagccaccaagctctccaatcgacagcccacatcggcatcggagatcgttcag
gtgacgctgatcctgcggcttatgaaccagctgttcgccaagaaggacgacctgatcaaa
tacctaaacgatcacctcaaaggcaccatgggacggaacaccaacctgctgcgtcagctc
ttcaccctactgcggacgtcctcgaaccttgcttcttcctcgcccgcgttgctggaaatg
ttggatgcatgcgtgcggtgcatcaaccacttcgccaccagccacccgcttcaggtgtgg
gaggaaatgcggcgcggaggagtgctgcaagagatgtcgtcctctatcaagggcaagccc
gacggtgacatcaggcagattctgatgctggagcagaggaacggcctctacccaatcacg
atatccttcctcaaccttctctatacgctgctcagttatgcgcgcaagtggcagctccca
gaaacgcaaacaaacaccatgcaagacgaaggggacatggactcggtatccttggaggat
ttccacccgtgcttgtccttcgtcaaggctgacctgttcgcgcgctacgagtcctggcgc
taccagaagccgcaacaaaagcacaaaatcggaatcaagatcatgaacatatttattgat
atcctcagcgaagacaccgtcaagaacttgaccgggcagaccctgccaatggcaaagacg
gatatggacctgtccttggcgtcccccatggccaagtatcagccgatgactcctctaggc
tgctttcacttctatgcgggattcggcttgattcgggctttgctgcgacgggtgctcgcc
caccctcgctcgttggctacctgggaacgcaagcggaagcacttcaaaacgcagaacctg
agggtggaaattctgcgactggtggagaaggcgcttcgccaccaacctggcctcgcgttg
ctcttcatcaacatcgacgccaacaaggccaagcgaggcggcgaaaaggatggcgaaaac
gtgcaggagtcccacagctgcctcaagctcgtccgcaagatgctagccaacagtcggcac
aacatgtccagtctgcctcgcctcttcgccgaagtcacatccctcctggggtcgctctgg
cgggccgcgccaagccatcagtccatcatcagagcgctccgggagagtccggacttctgg
aagcaactcaccgagacactgagcgtcagcatcgagcggcacctccacgcctacaacgtg
cgccaagctgccttgaatccaaccaaggccgccaaatcgcccagcggcagcgaaaagggg
aaggaacggctgactgacgacctcgatgacgaaccgggttag
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