Acanthamoeba castellanii: ACA1_142690
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Entry
ACA1_142690 CDS
T02667
Name
(RefSeq) pinin/SDK/memA/ protein region protein, putative
KO
K13114
pinin
Organism
acan
Acanthamoeba castellanii
Pathway
acan03013
Nucleocytoplasmic transport
acan03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ACA1_142690
03015 mRNA surveillance pathway
ACA1_142690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_142690
03041 Spliceosome [BR:
acan03041
]
ACA1_142690
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
ACA1_142690
Spliceosome [BR:
acan03041
]
Complex C
Other components
EJC/TREX
ACA1_142690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_memA
Cytadhesin_P30
Motif
Other DBs
NCBI-GeneID:
14923510
NCBI-ProteinID:
XP_004349654
UniProt:
L8HDV8
LinkDB
All DBs
Position
Unknown
AA seq
374 aa
AA seq
DB search
MANAPSTSALDLVPLSEMADVFQLERRRREVEKRLREIESREAHLKGKGKGAAGRGKRGR
ENENGGPDAGPHDDAVSDPDATQPKRRLLSSAVLTSHAAAAAAADEEDEGRGRKRAREGR
NPERGADDHDHVASTHKRRAVGEERGGREEFRRGGHDSEGGREEREERRQKEREEREKEW
VKKAGGDATRNRRVFGVLLGTLQRFRKDQTAVAEKITKQVEEKVKEESETLVKEEERRLA
EEKEKHQALREELTQQIEEHQRKELEAQWGEHRKLVSRFRKTEAKPHICYAFNDGGATTH
HHHDDGSDSDAAERHGRHRRHRDSSDSEDSSDSESDAKPPPREKTSSRGNETNDQETKEQ
DDHAQHRSSTEAEA
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgcaccatcaacgagcgcgttggacctcgtgccgctctccgagatggctgat
gtgttccagctcgagcgcaggagacgggaagtagagaagcgcctccgcgagatcgagtcg
cgagaggcccacctcaaggggaaagggaagggcgcagccgggcgaggcaagcggggccgg
gagaacgagaacgggggtccagatgcagggcctcatgacgacgcggtgtccgaccctgac
gcgactcagccgaagcggcgcctgctgtcctcggccgtgctcacctcacacgccgccgct
gccgccgccgcggacgaagaggacgagggccgcggccgcaagcgagctcgagaaggcaga
aacccggagcgcggcgccgacgaccacgaccacgtggccagcacccacaagcgacgggcc
gtcggggaggagcggggcgggcgggaggagttccggcggggcggccacgacagcgagggg
ggaagggaggagcgggaggagcgtaggcagaaggagcgggaggagcgggagaaggagtgg
gtcaaaaaggcgggcggcgatgccacgaggaacaggcgggtgttcggcgtcctcctcggc
accctccagcgcttccgcaaggaccagacggccgtcgccgaaaagatcacgaagcaagtg
gaggagaaggtcaaggaggaatccgagaccctggtcaaggaggaggagaggcgtctggcc
gaggagaaggagaagcaccaggcgctgcgcgaggagctcacccagcagatcgaggagcac
cagcgcaaggagctcgaggcgcaatggggcgagcatcgcaagctcgtgtcgcggttccgc
aagacggaggccaaaccgcacatctgctacgccttcaacgacggtggggcaaccacccac
caccaccacgacgacggctcggacagcgacgctgccgagaggcacggccggcaccggcgg
caccgagacagcagcgacagcgaggacagcagcgacagtgagtccgatgccaagccgccg
ccgcgagagaagaccagcagccgcggcaacgagaccaacgaccaggagacgaaggagcag
gacgaccacgcgcagcataggtcctccacggaggccgaggcctga
DBGET
integrated database retrieval system
