Acanthamoeba castellanii: ACA1_149460
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Entry
ACA1_149460 CDS
T02667
Name
(RefSeq) LSM domain containing protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
acan
Acanthamoeba castellanii
Pathway
acan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACA1_149460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_149460
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ACA1_149460
mRNA degradation factors
5'-3' decay
Lsm complex
ACA1_149460
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
14923737
NCBI-ProteinID:
XP_004351555
UniProt:
L8HDE1
LinkDB
All DBs
Position
Unknown
AA seq
135 aa
AA seq
DB search
MNQDALAEVDDFTFLPGTVSLVEEVDHRILVVLQDGRKLLGVLRSFDQYANLVLEQTIER
IYVGEQYAEKNLGLFLVRGDNIVLLGPIDESREELCVKGLTKVTLPEIEAARKAEREAKR
AQWELKQKMNQDPWS
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaggacgcccttgctgaggtcgatgacttcactttcctgccgggcaccgtgagc
ctggtagaggaggtagaccacaggatccttgtcgtgctccaggatggacgcaaactgctg
ggcgtgttgcgctcttttgatcaatacgccaatcttgtactggagcagaccatagagcgc
atttatgtgggcgagcagtatgccgaaaagaatcttgggctcttcctcgtgcggggcgac
aacatcgtgcttcttggacccatcgatgagagtagagaggagctgtgcgtgaagggcctc
accaaagtgacgttgcctgagatcgaggcggcgcgaaaagcagagagggaggcaaagagg
gcacagtgggagctcaagcagaaaatgaatcaggacccctggtcttaa
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integrated database retrieval system