Acanthamoeba castellanii: ACA1_171520
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Entry
ACA1_171520 CDS
T02667
Name
(RefSeq) DNA repair helicase rad25 subfamily protein
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
acan
Acanthamoeba castellanii
Pathway
acan03022
Basal transcription factors
acan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ACA1_171520
09124 Replication and repair
03420 Nucleotide excision repair
ACA1_171520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acan03021
]
ACA1_171520
03400 DNA repair and recombination proteins [BR:
acan03400
]
ACA1_171520
Enzymes [BR:
acan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACA1_171520
Transcription machinery [BR:
acan03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ACA1_171520
DNA repair and recombination proteins [BR:
acan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ACA1_171520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
ResIII
Helicase_C
DEAD
AAA_34
DUF3638
Glyco_hydro_4C
Motif
Other DBs
NCBI-GeneID:
14925599
NCBI-ProteinID:
XP_004356478
UniProt:
L8HIS6
LinkDB
All DBs
Position
Unknown
AA seq
560 aa
AA seq
DB search
MKNYYTVKLVLKDGEYFVESHSPSILNIIQQRVLGQVEMSNFSTTDEETGAQVLVYALPI
STVQEVAEIKKLLLAHNHPFIEEFDFLTNRWSEKACANLAINLKEGTGVRPYQKRAAFSL
FWDNKAHSSILVLPCGAGKTLVGITVSSIIKKCILVFCTSMMAVNQWREQFLKWSDIEPS
RISRFISDTRKKGEWDHTCGLLITTYNMFTSEKRAEHSTRMIEKCKERTWGLMILDEVHL
APATTFKRVTTEFRAHVKLGLTATMVREDELIAELPTLVGPRLDEVDLLSLKIHNHVANV
HCYRIVCPLTSAFGAAYRTARSPAEKRLLHITNPNKARIVFTLLKRHLRRGHKCLVFCDD
LFGLQWFSQVLGSPYIDGETKNEDREKSLNMFRTTKSSAYVLISKVGDHSIDLPEANVVI
QVGVVDGSRMQEAQRLGRVQRKKPGADVSAYFYTIVSEGTDEVGYSDRRREFMEEHGYLY
HEYDYKHFMHAETEEFTRDSKQDNLLAAIRQEMEKNPEGRSEYSELDDKPTKRETKKKGT
TRQRLNKIVNKRTGGREARE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaactactacacggtgaagctggtgctcaaggacggcgaatatttcgtggagagc
cattcgccgtcaatcctcaacatcatccagcagcgtgtcctgggccaggtggagatgagc
aatttcagcaccaccgacgaagaaacgggcgctcaagtactggtctacgcgctgccgatc
tcgaccgtgcaggaagtggccgagatcaagaagctgctcctggcccacaaccaccccttc
atcgaggagtttgattttctgaccaaccggtggagcgaaaaggcgtgcgccaatctggcg
atcaacctcaaggagggcacgggggtgcgcccgtaccagaagcgtgccgcattctctctc
ttctgggacaacaaggcgcactcgtcgattctagtgttgccgtgcggtgcgggcaagacg
ttggtgggcatcacggtgtcgagcatcatcaagaagtgcattcttgtgttctgcacgtcg
atgatggccgtcaatcagtggcgcgagcagttcctcaagtggtcggacatcgaacccagc
cgcatctctcggttcatttcggacacgcggaagaagggcgaatgggaccacacgtgcggt
ctcctgatcaccacctacaacatgttcacctccgagaagcgagctgagcactcgactcgc
atgatcgagaagtgcaaggagaggacgtggggcctcatgatcctggacgaagtgcacttg
gcgccggcgacgacgttcaagcgcgtgacgaccgagttcagagcgcacgtcaagctcggt
ctgacggccaccatggttcgagaggatgagctgatcgccgagcttcccacgctggtgggg
ccgcggctcgacgaagtggatctgctgtcgctcaagattcacaaccacgtggccaatgtg
cactgctatcgtatcgtgtgtccgctgacctctgccttcggcgctgcctaccggaccgcg
cgatcgcctgccgaaaagcgactgctgcacatcaccaacccgaacaaggcgcgtatcgtg
ttcacgctgctgaagcgacacctgaggcgcggacacaagtgtctcgtattttgcgacgat
ctgttcgggcttcagtggttcagccaggtcttgggcagcccctacatcgacggtgagacc
aagaacgaggaccgagagaagtcgctcaacatgttccggacgacgaagagcagcgcgtac
gtgctgatctcaaaggtcggcgatcactcgatcgatttgccggaagccaacgtggtgatc
caggtgggcgtggtcgacgggtctcgtatgcaagaggcgcagaggttgggccgagtgcag
cgtaagaagcccggagccgacgtgtcggcctacttctacaccatcgtgtccgagggcacc
gacgaggtgggctactccgatcggcgacgtgagtttatggaggagcacggctatctctac
cacgagtatgactacaagcacttcatgcacgccgagacggaggagttcacgcgcgacagc
aagcaggacaacttgttggccgccatccgacaggagatggaaaagaatcccgaaggccgc
tccgagtactctgagctggacgacaagccgacaaagcgcgagaccaagaagaagggcacc
acgcgccaacgtctcaacaagatcgtcaacaagaggaccggcggcagggaagcgcgcgaa
tga
DBGET
integrated database retrieval system
