Acanthamoeba castellanii: ACA1_172850
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Entry
ACA1_172850 CDS
T02667
Name
(RefSeq) DNA mismatch repair protein msh2, putative
KO
K08735
DNA mismatch repair protein MSH2
Organism
acan
Acanthamoeba castellanii
Pathway
acan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ACA1_172850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acan03400
]
ACA1_172850
DNA repair and recombination proteins [BR:
acan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
ACA1_172850
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
Motif
Other DBs
NCBI-GeneID:
14925682
NCBI-ProteinID:
XP_004356558
UniProt:
L8HJ01
LinkDB
All DBs
Position
Unknown
AA seq
961 aa
AA seq
DB search
METTTGLTFAVRHCEQNGPNYYHTAHGEDALLIANDYYHTTDAITYLGAEGPDGRGGIPS
QAISPSLFVDIVRDLLVNKRNRIEVWAVPTGGPKNTQNNWQIIKRASPGNIHDFEDLMFQ
DDVGAAGADNPITLALQFGFKDGQRMVGAAFIDLNTRTLNVCEFIDDDHLSNVYVSLYHA
QDALERLWTDVGRHIYAPCHDRSESLVVQVGATECLLAQEDEAETTRILTVLEACNVLDT
PKRKGGDHATHQFSVRRGEFAIHTLEQDLTTLLALPPLQHNYDEMQKQFAMGAAACLIRH
FELLSDSNNINKWHLKSHNFGQYMRLDRTAFVTLHLIPEGKEKRSMSLFSLLNHCRTPMG
SRRLVQWIKQNIVELFFDDHELRGTLQENLLKRVPDVNRLMRKIVKGNAGLQDILRLYQF
VEKLVGIHMALSFYAGEHKDLITAKYEEPLAELIESFKQFEAMVETMVDLSLIDQHEYRI
RPDFDDDLKEFYKGLQKSKQKMEDLRSRIADDLKLDSKELKLESSKHVGYFFRLTARNEK
LIRNRKDFIRVEGQKKDGVKFRNSDLHRLNEDYKKFNRSYEQKQAQIVASVVTTTSTYQQ
PMERASEIIADLDAFVSMAHVSANWRYTRPQLTEPGVGDIIIKGSRHPCLETMDQINFIA
NDVNLTRESRVQIITGPNMGGKSTYIRQVAMVVLMAQMGCFVPAESASISIVDAILVRVG
AGDSQLRGISTFMAEMLETAAILRSATSKSLICIDELGRGTSTYDGFGLAWAISRHIAKE
IKAFCLFATHFHELTSLADEIPHVANLHVTAQTGDEDKLADLTFLYQIRPGACDQSFGIH
VAKMTNFPEEIVKVAEAKAAELESFDTVLVKEHQLSPSKRLANKGKQKADEASSPAAQDQ
SSSDADELAGVAERLLQDMEVAGLDQLPRAEAMEKIAALVARIDQAKANNPRLAALLANT
H
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgaccactggcctcaccttcgccgtccgtcactgtgaacagaacggacccaac
tactaccacacagcccacggcgaggacgcactcctcatcgccaacgattactatcacact
accgatgccatcacgtacctcggagcggaggggccagacggtcggggcggcattccttcg
caggccatctcgccttcgctgttcgtcgacatcgtccgcgatttgctcgtgaacaagcgc
aaccgcatcgaggtgtgggccgtcccgaccggcggtcccaagaacacgcagaacaattgg
cagatcatcaaacgagcctcgcccggcaacattcacgacttcgaagatctcatgttccag
gacgacgtgggagctgctggcgccgacaacccgatcacgctcgccctgcagtttggcttc
aaagatggtcagcggatggttggtgcggcattcatcgatctgaacactcgcacgctcaac
gtgtgcgagttcatcgacgacgaccatctatccaatgtgtacgtttccctgtaccacgcg
caggatgcgcttgagcgtctatggactgatgtgggacgtcacatctatgcaccatgccac
gaccgcagtgaatcgctggtggtgcaggtgggggcaaccgagtgtctgctcgcgcaggag
gacgaggccgagactacccgtatcctgactgtgcttgaggcgtgtaacgtgctcgacacg
cccaagaggaaaggtggcgaccatgccactcaccagttttccgtccggcgaggtgagttt
gcgatccatacgcttgagcaggacctgactaccctgctcgctctgcctccgcttcaacat
aactacgatgaaatgcaaaagcagtttgccatgggcgctgcggcctgcctgattcgtcac
tttgagcttctctcggacagcaacaacatcaacaaatggcacctcaagtcccacaacttt
ggccagtacatgcgacttgacagaacggcgttcgtgactctgcacctgattcccgaaggg
aaagagaagcgttcaatgagcctcttctccctgctcaatcactgccgcacgcccatgggt
tctcgtcggctcgtccagtggatcaaacagaacattgtcgagctgttcttcgacgaccac
gagctacggggcaccctgcaggagaacctcctgaagcgcgtgcccgacgtcaaccgcttg
atgcgcaagatcgtgaagggcaacgccggacttcaagatatccttaggctgtaccaattc
gtggagaagctggtgggcatccacatggctctcagcttctacgcgggcgagcacaaggac
ctcatcaccgccaaatacgaggaaccgctggccgaattgatcgagagcttcaagcagttc
gaggccatggtggaaacgatggtggacctctcgctgatcgatcagcacgagtaccgcatc
cgccccgactttgacgacgacctcaaggagttctacaagggcctgcaaaagtcgaagcag
aagatggaggacctacggagccgaatcgctgatgacctcaagttggactcgaaggagctc
aagctggagagctcgaagcacgtgggctacttcttccgactcacggccaggaacgaaaag
ctgatccgcaaccgcaaggacttcatccgcgtcgagggacagaagaaggacggcgtcaag
ttccgcaattctgatctccacaggttgaacgaggactacaagaagttcaaccggtcctac
gaacagaagcaggcacaaatcgtcgccagtgttgtcaccactacatccacgtaccagcag
cccatggagcgcgcttcggagatcatcgccgaccttgacgcgttcgtcagcatggcccat
gtgtcggccaactggcgttacacgcgaccgcagctcaccgagcccggcgtgggcgacatc
atcatcaagggaagcaggcacccgtgcctggagacgatggaccagatcaacttcatcgcc
aatgatgtcaacctcacacgagaatcgcgggttcagatcatcaccgggccgaacatgggc
ggcaagtcgacgtacatacgacaggtggcaatggtggtgctgatggcccaaatgggctgc
ttcgtgccggccgagtcggcctccatctcgatcgtcgacgccattttggtgcgggtcggc
gccggcgattcgcagctgcgcggcatctccaccttcatggccgagatgctcgaaacggcg
gccatcctccggtcggccacctccaagtcgctgatctgcatcgacgagctggggcgcgga
acgtcgacctacgacggattcgggctcgcctgggccatctcgcgacacatcgcgaaagag
atcaaggcgttctgtctgttcgccacccacttccacgagctaacctcgctggccgacgag
attccgcacgtcgccaacctccacgtcacggcccaaaccggtgacgaggacaagctggcg
gacttgacgttcctgtatcaaatccgccccggggcgtgcgatcagtcgttcggcatccac
gtcgccaagatgaccaacttccccgaggagatcgtcaaggtggcggaagcgaaggcggct
gagttggagagcttcgacacggtgctggtcaaggagcaccaactgagccccagcaagcgc
ttggcaaacaagggcaagcagaaggccgacgaagcgagcagccccgcggcgcaggaccaa
agcagcagcgatgccgacgaactcgccggtgtggcggagcgactccttcaggacatggaa
gtggccggcctcgaccagctgccgcgcgccgaggcgatggagaagatcgctgccctcgtt
gcgcgtatcgaccaggcgaaggcgaacaaccctcgcctggccgcccttctcgccaacacc
cattga
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