Acanthamoeba castellanii: ACA1_173310 Help Entry ACA1_173310       CDS       T02667                                  Name (RefSeq) MIF4G domain containing protein   KO K14327   regulator of nonsense transcripts 2 Organism acan  Acanthamoeba castellanii Pathway acan03013   Nucleocytoplasmic transport acan03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:acan00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     ACA1_173310    03015 mRNA surveillance pathway     ACA1_173310  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:acan03019]     ACA1_173310 Messenger RNA biogenesis [BR:acan03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      ACA1_173310    mRNA cycle factors     P-body specific factors      ACA1_173310 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  MIF4G Upf2 Motif Other DBs NCBI-GeneID:  14925728 NCBI-ProteinID:  XP_004356603 UniProt:  L8HJ34 LinkDB All DBs Position Unknown AA seq 1361 aa AA seqDB search MSQHSRRWIAKPGEEEGAPPSAGPAQGNGGGRGRGRGGKLKARPDDRKAPPLAERLWART VLEEAVVVVDAAIEAALVMYRGRRTLLPPELPVSPLLALARTRQAQRPNAAVLAAVATGK GVPTRGAAKTDVEYELDKKKREEDRSRRRKERDGRKKVEEPPKTEEQLREELERKRREEE ERKKREEEEQERRRKEDEERRQREEEERKKREEEERLKREEEERKRAEEARKVREAKIAL RESNIHPKPDSNLRGDSSVKRNATFVRKLAKITEDQKDKLAAEISTLNTSKFIPEAVNVI AQELTVTLKPTDISASVHVCSLMHQRYGDFARHLVPALVKSYDLPGKTEVDTVRKKRVVL RLLCELYLAGVYTDITVLISIVRDLVNTNGAEFKGDREHFVNTFQNHLMLVVSFTRVIGD EVLGIVPEKHQFVQAEPLPPLDDTATPEQKDRLTVMVKNFYKASGELLVEEHKSLRAKER ENNKVLQTRGELSETDKAIYDKMRKSYDKLQNNVAAFAELLDEELPALPEEDTTTRIVVA DSTQTNKLGARTQEVEPIWNDEDTRSFYEDLPQLRVLLPAVLFGDSKKDEAEEKEAAVTT DKEKEGATETTPGGDAGGAKKATAVEDSATAAKEKEEEKMSVGGVTLEELLHRLPNCVNR DLIDKAAIDFCYINTKGNRKKLIKTLFNAPRTQLALLPYYARLVATLNQCMKDIGPALVA MLEEEFNYFMRKKDQMMIETKLKNIRFLGELVKFRVCPLHLIFNCLKECLDDFLHHNIEV ACALLDQCGRFLYRNPETHVRAKNMLDIMMRLKGSKNLDNRLANNVENAYYQCIPPERPA RKEKTIPPMVQYTHKLVYNDLNRHTVKNILKQLRKLPWDTEEAQILDTFVKIHKGKYGNI HVVASLAAALSQYHDVMGTKLNPDFKYQQRRVAEVKYLGELYNYRLIESGTIFYALYLLL NHAAGDLTLDPPDDCFRIRLICVLLDTCGKYFDRGTSKKRLDRFLVYFQRYYLSKQYVPI DIEFMVSDAMESLRPKLQRYQTFEEAVTETEKLEKEEEAAHPPNHYPKGPIYIDKEILHE EEEEERREVDNEEEKEADDDTNTQPANSDVIKDDEDDEDGDDSDDEDDEEEEEEDDEEAQ EEKAANGPNRVEDRRDPDDEEFERALQKMMRESYEQRRQDAKPVNVHTELLKPLDLLGTK KDNVVKEIGQGEKAMEFRVMLKRGKERQTKNVAIPMDCSLAVLRAQQKAEENREHEELKR RTLAAYDERAEEEKEIDEMIGSTGLAFSAAAGRGRGNQKARRQQTQSTTQRLLANAAKST APTSFPAGGSAAVRVATEGRKRARAETGECRVNAERGHTAD NT seq 4086 nt NT seq  +upstreamnt  +downstreamnt atgtcgcagcactctaggaggtggatagccaagcctggggaagaagaaggagcacctccg tctgcaggaccagcgcagggcaatggaggcggccgcggccgcgggcgtggcggcaaattg aaggcaagaccagacgaccggaaggcaccaccgctggcggagcgcctgtgggcacgaacg gtgctggaggaggcggtggtggtggtggacgcggcaatagaggcggcgctcgtgatgtac agaggaaggagaacgctgttgccgcccgagctgccggtgagccctctgctggcgctggcc cgaacgcggcaagcacaaaggccgaacgcggcggtgctcgcggcggtggcgaccggcaaa ggagtgccaacccgtggcgctgccaagacggacgtggagtacgagctggacaagaagaag cgcgaagaggacagatctcgtcgccgcaaggaacgcgacgggcgaaagaaagtcgaggag ccgcccaagaccgaggagcagctgcgcgaagagctcgagcgaaagcgcagagaagaggag gagcggaagaagcgcgaagaggaggaacaggaaaggcggcgcaaggaggacgaggagcgg cggcagcgtgaggaggaagagcgcaagaagcgggaagaagaggagcgactgaagcgagag gaggaggagaggaaacgggccgaggaggcccgaaaggtgcgtgaggcaaagatcgcccta cgcgagtcgaacattcaccccaagccagactccaacctgcgtggcgactcaagcgtgaag cggaatgccacgttcgtgcgaaagctggccaagattaccgaggaccagaaggacaagctg gcggccgagatcagcacgctcaacaccagcaagttcattcccgaggccgtcaacgtcatc gcgcaggagctcaccgtcacgctcaagcccaccgacatcagcgcctccgtgcacgtgtgc tcgctgatgcaccagcgctatggcgactttgccaggcatctggtgccggcgctggtcaag tcctacgacttaccgggcaaaaccgaggtcgacaccgtgcgcaagaagcgcgtcgtgctc aggctactgtgcgaactctacctcgccggcgtttacaccgacatcaccgtgctcatctcg atcgtcagggacctcgtcaataccaacggcgcagagttcaaaggcgaccgggagcacttc gtgaacacctttcagaaccatctcatgctcgtggtgagcttcaccagggtcatcggcgac gaggtactcggcatcgttccggagaagcatcagttcgtccaggccgagcccctgcctccc ttggacgacacagccacgccggaacagaaggatcgccttaccgtgatggtgaagaacttt tacaaggcctccggcgagcttttggtcgaagagcacaagagcctgcgtgcgaaggagagg gagaacaacaaggtgctgcagacgaggggcgagctcagcgaaaccgacaaagcgatctac gacaaaatgcgcaagtcttatgataagttgcagaacaacgttgcggcgttcgccgagctt ttggacgaggagctgcctgccctgccggaggaagacaccaccactcgcatcgttgtcgct gacagcacacagactaacaagctcggggcaaggacacaggaggtagagcccatttggaac gatgaggacacgcgctctttctacgaagaccttccacagctccgtgtgctcctgcccgcc gtgctctttggcgacagcaagaaggacgaggccgaggagaaagaggctgcagtgacaacc gacaaggagaaggagggagcgaccgagaccacgcccggcggtgatgcgggcggagccaag aaggccacggccgtggaggacagcgccaccgccgccaaggagaaggaggaggagaagatg tccgtgggcggggtcaccctggaggagctgctgcaccgtctgcccaactgcgtcaacaga gatctgatcgacaaggccgccatcgatttctgctacatcaacaccaagggcaatcgcaag aagctcatcaagacactgttcaacgcgcccaggactcagcttgccctgcttccgtactac gcccgccttgtggcgacgctcaaccagtgcatgaaggacatcggacccgcccttgtggcc atgttggaggaagaatttaattatttcatgaggaagaaggaccagatgatgatcgagacc aagctcaagaacattcgattcctcggcgaattggtcaagttccgagtgtgccccctgcac ctgatcttcaactgcttgaaggagtgcctcgacgacttcctccaccacaacatcgaggtg gcttgcgcgctgctggaccaatgtggtcgcttcctatacagaaatcctgaaacgcacgtg cgcgcgaagaacatgttggacatcatgatgcgactaaagggcagcaaaaacctggacaac cgcctggcgaacaacgtcgagaatgcctactaccagtgcatcccgccagaacgtcctgcg cgcaaggagaagacgattccgccgatggtgcagtacacgcacaagctggtctacaacgat ctcaaccgtcacacggtcaagaacatcctcaagcagctccgaaaactgccgtgggacacc gaggaggcccagattctcgacacgttcgtgaagatccacaagggcaagtacggcaacatc cacgtggtggcttcgcttgccgccgccctgtcgcagtaccacgacgtcatgggaaccaag ctcaaccccgatttcaagtatcaacagaggcgcgtcgccgaggtgaaatatctgggcgag ctctacaattaccgcctcatcgaatctggcaccatcttctacgcactctatcttctactc aaccacgccgccggcgatctcaccttggacccgccggacgactgtttccgcattcggctg atctgcgtgctgctggacacgtgtgggaagtactttgaccgcggcacctccaagaagcgg ctcgaccgcttcctcgtctacttccagcggtactacctgtccaagcagtacgtcccgatc gacatcgagttcatggtgtccgacgccatggagtcgctgcgccccaaactgcagcgctac cagaccttcgaggaggccgtcaccgagacggagaagctggagaaggaagaggaggccgct catcctcccaaccactaccccaagggtccgatctacatcgacaaggagatcctgcacgaa gaggaagaggaggagcgccgtgaggttgacaacgaggaggagaaggaagccgatgacgac accaacacgcagcctgccaacagcgacgtcatcaaggatgatgaagatgacgaggacggt gacgacagtgacgacgaagatgatgaagaggaagaggaggaagacgacgaagaggcgcag gaggagaaggccgctaatggccccaaccgcgtcgaagaccgccgtgaccctgacgatgag gagtttgagagggcgctgcagaagatgatgcgagaatcctacgagcagaggaggcaggac gccaaaccggtcaacgtccacacagagctcctcaaaccgctcgaccttctcggcaccaag aaggacaacgtggtgaaggaaatcggccagggcgagaaggccatggagttccgcgtcatg ctcaagcgcggcaaagaacgacagaccaagaacgtggcgatcccgatggactgctcgttg gccgtgctgcgggcgcagcagaaggccgaggagaaccgcgagcacgaggaactcaagcgt cgcaccctggccgcctatgacgaacgcgccgaagaggagaaagagatcgacgagatgatc gggtccacggggttggcattcagcgctgcggcgggacgcgggcgaggcaaccagaaggcg aggcgacagcagacccagagcaccacccaacgcctcctggccaacgctgccaagtcgacc gcccccacctccttccccgccggcggctctgctgccgtacgagtcgccactgaggggcgc aagcgcgcacgagccgagactggagagtgcagagtgaacgccgagagagggcacacggcc gactaa

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