KEGG   Acanthamoeba castellanii: ACA1_175320
Entry
ACA1_175320       CDS       T02667                                 
Name
(RefSeq) RNA recognition motif domain containing protein
  KO
K12842  U2-associated protein SR140
Organism
acan  Acanthamoeba castellanii
Pathway
acan03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ACA1_175320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:acan03041]
    ACA1_175320
Spliceosome [BR:acan03041]
 Complex A
  U2 snRNP components
   U2 related factors
    ACA1_175320
 Complex B
    ACA1_175320
SSDB
Motif
Pfam: Surp RRM_1 CID CTK3 RRM_5 RRM_7 Het-C
Other DBs
NCBI-GeneID: 14925889
NCBI-ProteinID: XP_004356758
UniProt: L8HJJ2
LinkDB
Position
Unknown
AA seq 964 aa
MADKKEVNQAKLQALTSGAKKKSPFQKQLEQIEAKKKKQEEEAAAMLDEFVASFAADEEK
GSGSKTFVRGETFVPHTVLDKASATSTASSGKLYKPAPKIKTATKQEAPAAIAPQDKSSA
TRSIDELKDMFIKEQQKRDERFSGVAPEKAKQLERLERLKELSESLPPLGSHDSGDPYTT
NLYVGNVSPQANEELLRKEFGKYGNIYSVKIMWPRTDDEKRRNRNSGFVQFEKREDAERA
KDALNGVELMGYELRIGWGKAVSKPVPGGIGAVPPSVTPPAHAAAPTASAWSATSAPGGG
GGAAVSPPPSMPGLLGMAPGMPPHGGMQPPPPQQQPGMPQGGMPLGMPPQGPPPQFMPMP
GAPMPPPFYGGVPPQMPPQQFMHPPGMPPHPGMAPGMEMAHAHPPPPPGFMNPPPPPGYA
HPPQGGYLPALQPPAGYPAPPPPMPLGEIRVTPPADPERLQLIHKLAQYVAKEGQHFEQL
IVEREKGNAKFHFLVQTDSPDHIYYRWRTFSLMHGDTMEMWRTEPFQMFPGGPFWFPPPP
PGKESAQVGSGAPGAPHLPQQLQPQPQPKVVISSVSSPAEERREKRGRSRSPSPRARSRS
RNYSRSPSPRRSRSRSRRSRSRSRSRSYSRSPSRSRSRSPSRSRSRSRSRSRSRSRSRRH
RERSRDRSPSRDDDRYRRRSASRGDERASLRNSRDRDRDRDRSRDRERERDAERDRRPRS
REREGPQGATGASRTVRKGKGLTEEQRDDFEDLLRGLTTHRQRIRDVMGFAIDNSEAAGE
IVQVLTEALTLDETPIPTKIARLFLVSDILHNSTAAVRNAHAYRSLFQKQLPNVFESFST
ALRNASGRMSAEQLKEQVMRVLRVWEAWSVYPQPFLTTLHETFLRPAPQEEEERAKVREG
GVEDVDEEDIDGIPPCMSGLSIAPFISLSLSLSRLRRANHPRACSALHHNQTELDKITTP
QYRI
NT seq 2895 nt   +upstreamnt  +downstreamnt
atggcggacaagaaggaggtcaatcaggccaagctgcaggccctgacctcaggcgcgaag
aagaaatcgcccttccaaaagcagctcgaacaaatcgaagccaaaaagaagaaacaagag
gaagaggcggccgcgatgctcgatgagttcgtggcttcgttcgcagcggacgaggagaaa
ggcagcggcagcaagacgttcgtacgtggcgagacgtttgtgccgcacacggtgctggac
aaggcctccgccacctcgacggcctcctctggcaagctctacaagccagcgcccaagatc
aagactgcaaccaagcaggaggcgccggccgccattgcaccgcaggacaagtccagcgct
acgcgctcgatcgatgaactgaaggacatgttcatcaaggagcaacagaagcgagacgag
cggttctcaggagtagcgcccgagaaagcgaagcagttggagcgcctggagcgcttgaag
gagctgagcgagagtctccctccgctgggatctcatgactcgggggatccctacaccacc
aacctctacgtaggcaacgtctcgccacaggccaacgaggagcttctgaggaaggagttc
ggcaagtacggcaacatctacagcgttaagatcatgtggccgcggacagacgacgagaag
cgacgcaacaggaattcgggcttcgtccagtttgagaagcgcgaagacgccgagcgggcc
aaggacgcactcaacggggtggagttgatgggctacgagctgcgcatcgggtggggcaag
gctgtcagcaaaccggtgccggggggcataggcgcggtcccgccgagcgtcacccctccg
gcccacgccgccgcaccgacggcctcggcctggtccgcgaccagcgcacccggcggcggc
ggtggcgcagccgtgtctccgccgccctccatgccgggcctcctcgggatggcccccggc
atgccgccgcacggtggaatgcagccgccgccgccgcaacagcagccgggaatgccacag
gggggaatgccgctgggcatgccgccgcaaggcccgccaccgcaattcatgcctatgccg
ggagcgccgatgcctccgccgttctacggcggcgtacctccacagatgccgccgcagcaa
ttcatgcaccctcccggcatgcctccgcatccgggcatggcgcccggaatggagatggca
cacgcacacccgcctccgccgcctgggttcatgaacccaccgccaccaccgggctacgca
cacccgcctcaaggcggctatctgccagccttacaaccgcctgctgggtacccggccccg
ccgccgccgatgcctctcggcgagatacgggtcacgccgcccgccgatcccgagcgactc
caactcatccacaagctcgcacagtacgtggccaaggagggacagcattttgagcaactc
atcgtcgagcgcgagaagggaaacgccaagttccacttcctggttcagaccgattcgccg
gaccacatctactaccgatggcgaaccttttctctcatgcacggcgacaccatggagatg
tggaggaccgagcccttccagatgttcccgggcggaccgttctggtttccgcctccaccc
ccgggcaaggagtcggcgcaggtgggcagtggtgcgcccggcgcgccgcatctaccgcag
cagctgcagccacaacctcagccaaaggtggtaatctcgtcggtgtcgagccccgcggag
gagcgcagagagaagcgaggccgaagccgcagccccagcccgcgcgccagaagccgaagc
cgtaactacagcagatcgccgagcccgcgccgtagccgcagccgcagtcggcgaagccga
agccggagcaggagccgcagctattcgagaagcccaagtcggagtcgcagccgcagccct
agccgaagcaggtcgcggagcaggtcacgaagcaggagcaggtcaaggtcaaggcgccat
cgagaaaggagccgcgaccgaagcccgagccgagacgacgaccgataccgccggcgatcg
gccagccggggcgacgagcgagcaagcctgcgcaacagcagagaccgagaccgagaccgg
gaccgcagcagggacagggagagggagagggatgcggagagggatcggcggccgcgaagc
cgggagcgagaggggccgcagggcgccacgggcgcgtcgcgaacagtgcgcaagggcaag
ggcctgaccgaggagcagcgcgacgactttgaggacctgctccgcgggctcaccacgcac
cgacagcgcatccgcgacgtcatgggcttcgccatcgacaactcagaggcggcgggcgag
atcgtgcaggtgctcaccgaggcgctcaccctcgacgagacccccatccccaccaagatc
gcgcgcctcttcctcgtctccgacatactccacaactccaccgctgccgtccgcaacgcc
cacgcctatcgctcactgtttcagaaacagttgccaaacgtgttcgagagcttcagcacg
gcgctgcgcaacgcgtcagggcgtatgtcggccgagcagctgaaggagcaggtgatgcgc
gtcctgcgcgtgtgggaagcctggagcgtctacccgcagccattcctgaccaccctccac
gaaacctttcttcggccggcgccgcaggaagaggaggagcgcgccaaggtgcgcgaaggt
ggcgtggaagacgttgacgaagaggacatcgacggtatcccgccatgcatgagtgggttg
tccattgctccttttatctctctctctctctctctctctcgccttcgtcgtgcaaaccat
ccgagagcatgttcggccttgcatcacaaccagacagaactggataagatcactacgcca
cagtaccggatttga

DBGET integrated database retrieval system