KEGG   Acanthamoeba castellanii: ACA1_178230
Entry
ACA1_178230       CDS       T02667                                 
Name
(RefSeq) transducin family protein
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
acan  Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:acan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:acan04121]
    ACA1_178230
Ubiquitin system [BR:acan04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     ACA1_178230
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_RIG_2nd NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_SCAP choice_anch_I Beta-prop_DCAF12 Beta-prop_SPT8 Beta-prop_DCAF4 WD40_like
Other DBs
NCBI-GeneID: 14916891
NCBI-ProteinID: XP_004338187
UniProt: L8GSK8
LinkDB
Position
Unknown
AA seq 460 aa
MEDADDDQLSTRYAAAKYAFLLPRIEMQEEEEGEEGEEGENEEHPDLVPADRQPRPPCPL
SETAVGHERELQGRWDGGVRAAVAVGLVAEGGYLHRPKPRILARFENQLFCGRFSEDGDV
FVSACQDRHIRIYDAAGPSFRLLRDVGARDVGWSILDTDISPDRRHLLYSSWSDFIHLVD
ISDDAAQDGHHEALDLKPRAHRFCVFSLQYSHDGSEVLAGSSDQSLYIYDLHRRERTLCI
DAHSDDINSVSWADETSHILFSASDDCLCKVWDRRALKGGKPVGVLVGHLEGITHVSSKR
DGRYLITNSKDQSIKLWDLRSMRQESRGQERSATFDYRYGDQYVSPTQRKIFEGKLVHAN
DCSINTYRAMMAQVFQTLVRCYFSPAAGTGQRYIISGSHDGAAVIYDLLSAEPVARLQAH
KRVVRDVAWHPHQPRIVTTSWDGTLREWVATPDVTPMLLE
NT seq 1383 nt   +upstreamnt  +downstreamnt
atggaagacgccgacgacgaccagttgagcacgcgctacgccgccgccaagtacgccttc
ctcctcccgcgcattgaaatgcaggaggaggaggaaggggaggaaggggaggaaggggag
aacgaggagcatcccgacctcgtaccggccgaccggcagccccggcccccgtgcccactc
tcggagacggccgtggggcacgagagggagctgcaggggcgatgggacggaggagtgcgt
gcggccgtggcggtcggcctcgtggcggagggcggctacctgcaccgccccaagccccgc
atcctcgcacgtttcgagaatcagctcttctgtgggcggtttagcgaggatggcgacgtg
tttgtgtcggcgtgccaggacaggcacatccggatctacgatgccgccggcccctccttt
cggctgctgcgggacgtgggcgcgcgcgatgtcggctggagcatcctcgacacggacatc
tcgcccgaccgccgccacctcctctactcctcctggagcgacttcatccacctggtggat
atctccgacgacgctgcgcaggatgggcatcacgaggccctcgacctgaagccccgcgcc
caccgcttctgcgtgttctcgctgcagtactcgcacgacggctccgaagtcctcgccggc
tcctccgatcagtcgctctacatctacgacctgcaccgacgggaacgcacgctgtgcatc
gacgcccacagcgacgacatcaacagtgtgagctgggccgatgagacctcccacatcctt
ttctccgcgagcgatgactgcttgtgcaaggtgtgggaccggcgggcgctcaagggcggt
aagcccgtcggagtgctggtgggtcacctggaggggatcacccacgtctcgtccaagcgc
gatgggcgctacctcatcaccaactccaaggaccaatccatcaagctgtgggacctgcgg
agcatgcggcaggagagccgcggacaggagcggtcggctacgttcgactatcggtatggg
gatcagtacgtctcgcccacccagcgcaagatctttgagggcaagctcgtgcacgccaac
gattgctccatcaacacctaccgcgcgatgatggcccaggtattccaaacgctggtgcgg
tgctacttctctcccgcggcgggcacgggccagcggtacatcatctcgggctcgcacgac
ggggcagccgtcatctacgacctcctctctgccgagcccgttgctcgcctgcaggcccat
aaacgtgtggtgcgggatgtggcgtggcacccgcaccaaccccgaatcgtgacgacttcc
tgggacggcacccttcgcgaatgggtcgccacgcccgacgtcacccccatgctcctcgaa
tga

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