Acanthamoeba castellanii: ACA1_178230
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Entry
ACA1_178230 CDS
T02667
Name
(RefSeq) transducin family protein
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
acan
Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acan04121
]
ACA1_178230
Ubiquitin system [BR:
acan04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
ACA1_178230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Beta-prop_SCAP
choice_anch_I
Beta-prop_DCAF12
Beta-prop_SPT8
Beta-prop_DCAF4
WD40_like
Motif
Other DBs
NCBI-GeneID:
14916891
NCBI-ProteinID:
XP_004338187
UniProt:
L8GSK8
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MEDADDDQLSTRYAAAKYAFLLPRIEMQEEEEGEEGEEGENEEHPDLVPADRQPRPPCPL
SETAVGHERELQGRWDGGVRAAVAVGLVAEGGYLHRPKPRILARFENQLFCGRFSEDGDV
FVSACQDRHIRIYDAAGPSFRLLRDVGARDVGWSILDTDISPDRRHLLYSSWSDFIHLVD
ISDDAAQDGHHEALDLKPRAHRFCVFSLQYSHDGSEVLAGSSDQSLYIYDLHRRERTLCI
DAHSDDINSVSWADETSHILFSASDDCLCKVWDRRALKGGKPVGVLVGHLEGITHVSSKR
DGRYLITNSKDQSIKLWDLRSMRQESRGQERSATFDYRYGDQYVSPTQRKIFEGKLVHAN
DCSINTYRAMMAQVFQTLVRCYFSPAAGTGQRYIISGSHDGAAVIYDLLSAEPVARLQAH
KRVVRDVAWHPHQPRIVTTSWDGTLREWVATPDVTPMLLE
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgccgacgacgaccagttgagcacgcgctacgccgccgccaagtacgccttc
ctcctcccgcgcattgaaatgcaggaggaggaggaaggggaggaaggggaggaaggggag
aacgaggagcatcccgacctcgtaccggccgaccggcagccccggcccccgtgcccactc
tcggagacggccgtggggcacgagagggagctgcaggggcgatgggacggaggagtgcgt
gcggccgtggcggtcggcctcgtggcggagggcggctacctgcaccgccccaagccccgc
atcctcgcacgtttcgagaatcagctcttctgtgggcggtttagcgaggatggcgacgtg
tttgtgtcggcgtgccaggacaggcacatccggatctacgatgccgccggcccctccttt
cggctgctgcgggacgtgggcgcgcgcgatgtcggctggagcatcctcgacacggacatc
tcgcccgaccgccgccacctcctctactcctcctggagcgacttcatccacctggtggat
atctccgacgacgctgcgcaggatgggcatcacgaggccctcgacctgaagccccgcgcc
caccgcttctgcgtgttctcgctgcagtactcgcacgacggctccgaagtcctcgccggc
tcctccgatcagtcgctctacatctacgacctgcaccgacgggaacgcacgctgtgcatc
gacgcccacagcgacgacatcaacagtgtgagctgggccgatgagacctcccacatcctt
ttctccgcgagcgatgactgcttgtgcaaggtgtgggaccggcgggcgctcaagggcggt
aagcccgtcggagtgctggtgggtcacctggaggggatcacccacgtctcgtccaagcgc
gatgggcgctacctcatcaccaactccaaggaccaatccatcaagctgtgggacctgcgg
agcatgcggcaggagagccgcggacaggagcggtcggctacgttcgactatcggtatggg
gatcagtacgtctcgcccacccagcgcaagatctttgagggcaagctcgtgcacgccaac
gattgctccatcaacacctaccgcgcgatgatggcccaggtattccaaacgctggtgcgg
tgctacttctctcccgcggcgggcacgggccagcggtacatcatctcgggctcgcacgac
ggggcagccgtcatctacgacctcctctctgccgagcccgttgctcgcctgcaggcccat
aaacgtgtggtgcgggatgtggcgtggcacccgcaccaaccccgaatcgtgacgacttcc
tgggacggcacccttcgcgaatgggtcgccacgcccgacgtcacccccatgctcctcgaa
tga
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