Acanthamoeba castellanii: ACA1_178740
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Entry
ACA1_178740 CDS
T02667
Name
(RefSeq) replication factora protein 1 (rpa1) subfamily protein
KO
K07466
replication factor A1
Organism
acan
Acanthamoeba castellanii
Pathway
acan03030
DNA replication
acan03420
Nucleotide excision repair
acan03430
Mismatch repair
acan03440
Homologous recombination
acan03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACA1_178740
03420 Nucleotide excision repair
ACA1_178740
03430 Mismatch repair
ACA1_178740
03440 Homologous recombination
ACA1_178740
03460 Fanconi anemia pathway
ACA1_178740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acan03000
]
ACA1_178740
03032 DNA replication proteins [BR:
acan03032
]
ACA1_178740
03400 DNA repair and recombination proteins [BR:
acan03400
]
ACA1_178740
Transcription factors [BR:
acan03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
ACA1_178740
DNA replication proteins [BR:
acan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
ACA1_178740
DNA repair and recombination proteins [BR:
acan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
ACA1_178740
MMR (mismatch excision repair)
ACA1_178740
DSBR (double strand breaks repair)
HR (homologous recombination)
ACA1_178740
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
SHLD2_OB1
Zn_ribbon_TiaS
DUF3565
Motif
Other DBs
NCBI-GeneID:
14916872
NCBI-ProteinID:
XP_004338218
UniProt:
L8GT81
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MSSQLTHGAVEAMHKGQQIRTPLVQVIDVKKILGPNGQATSPERYRLVISDGIHFQQAML
ATQLNELVNDGKLQPKCIVRLNEYICNTVHGRRFGGPSPSLAEGTMPIKGLNPYQNRWTI
KARITHKSDMRPFNNARGQSFLFSVDLLDAFGGEIRCTFFGEAATQWNDQIEAGQVFLIG
RGSVKYANKRFSTLKNDYEISLDKNALIQPTEDDPSIPFYKFNFVDIADLGGHAKDETID
ILGAVLESGAIQDIRTQAGNELQKRVVKVGDSSNAQVEVTLWGEQAAQWSGDRGLVVLFK
GVKISDYNQRSLTVLRTSKLEFEPRIPEADRVREWFETAGQGEVASMSRNDFKGRGGGGE
GGFGGGDKRPWDETRKSFAAVKQVAFGGQESVYFSVRATVTEIKHSRDHPPWYEACPTEK
CNKKVTSVGGAYHCTKCGATHDHYKPRYVLSLNANDHSGSSWLTCFNDTASDVLNGTTAD
DLLEMLSRPQGESQYEDVFQKALFKSYNLRVRATQSEYEGENKVKLSVVKVIPMDYAKES
KFLINSIAKYITA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagccagcttactcacggggccgtggaggccatgcacaagggccagcagattcga
acgcccttggtgcaggtcattgatgtgaagaaaattctcggcccaaatgggcaagccaca
agccccgaacgctaccgattggtgatttcggatggcattcatttccagcaggccatgctg
gctacacagctgaacgagctcgttaatgatggtaagctgcagcccaagtgcatagtccgc
ctcaacgagtacatttgcaacaccgtacacggccgtcgctttggcggcccgtctccctcg
cttgccgagggcacaatgccgatcaagggcctcaacccctaccagaaccggtggaccatc
aaggcccgcatcactcataagtccgacatgcgccccttcaacaacgcacgcggccagagc
ttcctcttcagcgtcgatctgctcgacgcctttggcggtgagatccgctgcacgttcttc
ggcgaggctgccacccagtggaacgatcagatcgaagccggtcaggtgtttctgatcggc
cgcggcagcgtcaagtacgccaacaagcggttctcgacgctcaagaacgactatgagatc
tcgctcgacaagaacgcgctcatccagcccaccgaagacgacccgtcgatccccttctac
aagttcaactttgtcgatatcgccgatctgggtggccatgccaaggacgagaccatcgac
atcctgggcgccgtgctcgagagcggcgcgatccaggacatccgcacccaggccggcaac
gagctgcagaagcgcgtcgtcaaggtgggcgattcgtccaacgcgcaggtcgaggtcacc
ctctggggcgagcaggccgcccagtggagcggcgaccgcggtctcgtggtgctgttcaag
ggcgtcaagatctccgactacaaccagcgctcgctcaccgtgctccgcacctccaagctc
gagttcgagccgcgcattcccgaagccgaccgcgtgcgggagtggttcgagacggccggc
cagggcgaagtcgccagcatgtcccgcaacgacttcaagggccgcggcggtggcggcgag
ggcggcttcggcggcggcgacaagcgcccgtgggacgagacgaggaagagcttcgccgcg
gtcaagcaggtggcctttggcggccaggagagcgtctactttagcgtgcgcgcgacggtg
acagagatcaagcacagccgggaccacccgccgtggtacgaagcctgcccgaccgagaag
tgcaacaagaaggtgacgtccgtcggcggcgcgtaccactgcaccaagtgcggcgccacc
cacgaccactacaagccgcgatacgtgctcagcctcaacgccaacgaccactccggctcc
tcgtggctcacctgcttcaacgacaccgcttcggatgtcctgaatggcacgactgcggac
gatctgctggagatgctgagtcggccgcagggcgagagccagtacgaggacgtgttccag
aaggccctcttcaagtcctacaacctgcgcgtgcgggcaacgcagagcgagtacgagggc
gagaacaaggtcaagctcagcgtcgtcaaggtcatccccatggactacgccaaggagtcc
aagttcctcatcaactccatcgccaagtacatcaccgcctaa
DBGET
integrated database retrieval system
