Acanthamoeba castellanii: ACA1_184680
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Entry
ACA1_184680 CDS
T02667
Name
(RefSeq) 5'3' exonuclease, SAM domain containing protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acan
Acanthamoeba castellanii
Pathway
acan03030
DNA replication
acan03410
Base excision repair
acan03420
Nucleotide excision repair
acan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACA1_184680
03410 Base excision repair
ACA1_184680
03420 Nucleotide excision repair
ACA1_184680
03440 Homologous recombination
ACA1_184680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acan03032
]
ACA1_184680
03400 DNA repair and recombination proteins [BR:
acan03400
]
ACA1_184680
Enzymes [BR:
acan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACA1_184680
DNA replication proteins [BR:
acan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACA1_184680
DNA repair and recombination proteins [BR:
acan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACA1_184680
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACA1_184680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
14921165
NCBI-ProteinID:
XP_004342509
UniProt:
L8H556
LinkDB
All DBs
Position
Unknown
AA seq
1070 aa
AA seq
DB search
MPHTILIDGSFLTHRAYHTPIAEMTNGAGVAVTALFSYTRSMLKMLQDPHFRADYIGVFV
DSGPSFRKQLYGEYKAHRSAPSAELRKQFPLVADATRALGIETIKAEGMEADDLIACYAK
VAQAQGHRVTIISRDKDLMQLVGPTVKLYDPVGKKTFDEAEVRKKFQVEPRQVRDVLALM
GDDGDNVPGVPGIGPKTAAALISEFNSVEELLANTAKITNKKRRQLIEEHVDTIRRALAL
VELRHDIPMPVLLEDLQRQPINRDKFLAFLREHSFGSIISKLDKICPPTAAEQAAEAAPR
TSSTRGRPRLDNPTQEAVQAPPAPLSVAVALKRPKVEIEGVTIVDTPEEARRVLRILRSP
GVRERYHACDTEAIKIEVKHQSPYNYGEVICASVYCGPDVDFGTGPNLWIDNMDDARGVL
DLFKEYFEDEGIKKVWHNYSFDRAMMWRHGIDVKGFGGDTIHMARLWDAARTSVGKKYSL
EALTGELLEGETKRSIKEIFGRNKVLKDGTLGKEIVAGMEALNNWIYYSTYDTRGTYELR
DKLEDQLREMPWVYEGKKALPGANRTMWDYYQNYWLPFGEVLTDMEREGIKVNVDYLAEI
EQVAVAEGKKHQIRFKEWASEYCQDARYMNPTSDAQKQQLFFAPCKNLKTDDMMPAERLF
DIENDEGIPDPVTGKVKKKRQIRISGFGLPAIAHTGAGWPAAGAEVLKQLAGKPFDNPPK
YGVAYKAFSEGEAGAEACQAIDSLVKMSSIDTLLSNFIVPLQHEVDPNNRIHASLNINTE
TGRLSCRRPNLQNQPALEKDIFKIRSSFTCEKGNKLIVADYGQLELRLLAHMTKCRSMID
AFQKGGDFHSRTALGMYSHVQEAIQKGEVLLEWGGEGKPPVPLLKDIFATERKRAKTLNF
SIAYGKTAMGLSKDWGVSLQEAKDTLQRWYSDRPEVLQWQENTIRTARKTGYTKTLMGRY
RPLPDISHSKPMMRGHAERAAINTPIQGGAADIVINAMVLAHHDELLRRWGWKMILQVHD
ELMLEGPAESAEEALARLIEVMQNPMPEGEELLVELAVDGKAGSTWYEAK
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacaccatcctcatcgatggttccttcctcacccaccgcgcctaccacacgcct
attgccgagatgacgaacggtgcgggggtggccgtcaccgccctcttttcctacacgcgt
tccatgctcaagatgctgcaagatccccatttcagagcggactacatcggcgtgttcgtg
gactcggggccttcgttccgcaagcagctgtacggcgagtacaaggcgcaccggtcggcc
ccttccgccgagctcagaaagcaatttccgctggtggccgatgcaacgcgagctctcggc
atagagaccatcaaggccgagggcatggaggcagacgacctgatcgcgtgctacgccaag
gtcgcgcaggctcagggccaccgagtgacgatcatcagcagggacaaggacctgatgcag
ctcgtgggtcccacagtgaagctctacgaccccgtgggcaagaagacattcgatgaagca
gaggtgcgcaaaaagtttcaggtcgagcccaggcaggtcagagacgtactcgccctgatg
ggcgacgacggagacaacgtgcccggcgttcctggaattggacccaagaccgccgctgcg
ctgatcagcgagttcaactcggtcgaggagctgcttgccaacacggccaagatcaccaac
aagaagaggcgacagctgatcgaggagcacgtggacactattcgccgcgcgctggcgctg
gtggagctgcgccacgacatccccatgcccgtcctgctcgaagacctgcagcgacagccc
atcaatcgcgacaagtttttggcgttcttgagggagcactcgttcggatcgatcatttcg
aagctggacaagatctgcccaccgaccgcggcggagcaggcggctgaagctgccccgcga
acctcatccacgcgcggccgcccacgattggacaacccaactcaagaggccgtgcaagct
ccgccagcgcctctgtcggtggcggtggcgttgaagaggccaaaggtggagatcgagggc
gtcacgatcgtggacactccggaggaggcccgccgggtgctgcgcatcctgcggtcgccg
ggcgtcagggagcgctaccacgcctgcgacacggaagccatcaaaatcgaggtgaagcac
cagagcccctacaactacggcgaagtgatttgcgcgtccgtgtactgcggacccgacgtc
gatttcggcaccggtcccaacctgtggatcgacaacatggacgacgcccgcggggtgctc
gacctcttcaaggagtactttgaagatgaaggaatcaaaaaggtgtggcacaactacagc
ttcgatcgagccatgatgtggcggcacgggatcgacgtgaagggattcggtggcgacacc
attcacatggcgcgtctgtgggacgcggcgcggacgagcgtgggcaagaagtactcgctc
gaggcgctcaccggcgagctgctcgaaggcgagaccaagcgatccatcaaagagatcttt
gggcggaacaaggtgctcaaggacggcacgctgggcaaggagatcgtcgccggcatggag
gcgctgaacaactggatctactactcgacctacgatacccgtggcacctacgaactgagg
gacaagttggaggaccagctgcgggagatgccgtgggtctacgagggcaagaaggcgctg
ccgggcgccaatcggacgatgtgggactactaccagaactactggctgcccttcggcgag
gtcctcaccgacatggagcgggagggaatcaaggtgaacgtagactatctagccgagatc
gagcaggtcgcggtggccgagggcaagaagcaccagatccggttcaaggagtgggccagc
gagtactgccaggacgcccggtacatgaaccccacgagcgatgcccagaagcagcagctt
ttcttcgcgccgtgcaagaacctcaagaccgacgacatgatgcccgccgaacgcctcttt
gacatcgaaaacgacgaaggcattcccgatccggtgacgggcaaggtcaagaagaagcga
cagatccgcatctccggcttcggtctcccggccatcgcccacactggggccggctggcct
gcggccggcgccgaggtgctcaagcaattggccggcaagcctttcgataatccgccaaag
tacggggtggcgtacaaggccttctcggagggcgaggcgggcgcggaggcgtgtcaggcc
atcgactcgctggtgaagatgtcctccatcgacacgctgctgtccaacttcatcgtgccc
ctccagcacgaagtcgacccgaacaaccgcatccacgcctcgctcaacatcaacaccgag
acgggccgcctgagctgtcgccgacccaacctccagaaccagcccgccctcgagaaggac
atattcaagattcgaagttcgttcacgtgcgagaagggcaacaagctgatcgtggccgac
tacgggcagctggagctgcgactgctggcccacatgaccaagtgccgctccatgatcgac
gccttccaaaagggaggcgatttccattcgcgtacggcgcttggcatgtattcgcacgtg
caggaggccatccagaagggcgaggtcctgctcgagtggggcggagagggcaagccgccg
gtgccgctgctgaaggatatattcgcgacggagcgcaagcgggccaagacgctcaacttt
tcgatcgcctacggcaagacggccatgggcctctccaaggactggggcgtcagcctccag
gaggccaaagacactctccagcgatggtactcggatcgaccggaggtactgcagtggcag
gagaacacgatcaggacggcgcgcaagacgggctacaccaagaccctcatgggccgctac
cggccgctgccggacatcagccactccaagcccatgatgcgcggccacgccgagcgtgcg
gccatcaacacgcccatccagggaggagcagcggacattgtaatcaatgcgatggtgctg
gcgcatcacgacgagctgctgcgaaggtggggctggaagatgatcctccaggttcacgac
gagctcatgctcgagggtcccgcggaatcggcggaggaggcgctggcgcgattgatcgag
gtcatgcagaaccccatgcccgagggcgaggagctgctggtggagctcgccgtggacggc
aaggccggcagcacctggtatgaggccaagtga
DBGET
integrated database retrieval system
