Acanthamoeba castellanii: ACA1_192060
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Entry
ACA1_192060 CDS
T02667
Name
(RefSeq) initiation factor eif4 gamma, middle, putative
KO
K12882
nuclear cap-binding protein subunit 1
Organism
acan
Acanthamoeba castellanii
Pathway
acan03013
Nucleocytoplasmic transport
acan03015
mRNA surveillance pathway
acan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACA1_192060
09122 Translation
03013 Nucleocytoplasmic transport
ACA1_192060
03015 mRNA surveillance pathway
ACA1_192060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_192060
03041 Spliceosome [BR:
acan03041
]
ACA1_192060
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
ACA1_192060
Spliceosome [BR:
acan03041
]
Common components
Common spliceosomal components
Cap binding complex
ACA1_192060
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
Motif
Other DBs
NCBI-GeneID:
14915066
NCBI-ProteinID:
XP_004336489
UniProt:
L8GQR7
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MNAVRWAEGSITQLPVKTPVYGTLVGLINAKNADFGREVVSKVGERLQQALHDRSALDVK
LLTRFLAELVNAHVLPAADLVALFDLLLASAAELDDSLQHSDLEHYAYVVLITIPFVAAT
LLRDLPDELDRLLRTLQRYVDAHKCPINPLTLVYPDPEAQDYFESYLWKQLAELKEDGWR
SGAILQPYVSFEDHLSTAPRHTLPTIALPPSSTEKGYGSLRGRVQTFRLFDAARTESPDM
KAFDRFLLQDYIVDLLHFFGSDHKTCTKFLLTLPGNFNYHNLLIETIFGQLFLLPTPPCK
LIYYAVVIGDLCKGSTAIPPVLGLAIDTLFERADMMDVECAERFCDWFSHHLSNFDFKWH
WQKWAYVLKMNEEEPKRLAVREILERTMWLAYYERVARTLPEEFIELMPRRPAPFLKYAD
VAAEDHEAYASLLAKVRAKEKSEQLRPWLDSLTSISTERRLDLALHALLEAGCKSFSHLL
NVLERYHALLRSLAGTVQARLAVTTAVGEFWKHSPQHIIITLEKLMTYRIVDAHSIVQWI
FSHQVLPFFTQGYLWDILRNTIDKTVMRTEVMRKELKAVQPDQQPALAEASGASTTATAV
DDVRLQQARESYQTALRDQNDLLLLVFQSFVVVLANHLANSRERDADPYDAWYRSAMGHF
KEVARRYHREAKALGAPLADAFAQSSDPRITDVLTHLHQF
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcggtgcgttgggcggagggcagcattacgcagctgccggtgaagacgccggtg
tacggcacgctggtgggcctcatcaacgccaagaacgccgactttggccgtgaggtggtg
agcaaggtgggcgagcggctgcagcaggcgctgcacgatcgcagcgcgctcgacgtgaag
cttctcacccgcttcctggccgagctcgtcaatgcgcacgtgctgcccgccgccgatctc
gtcgccctgttcgacctcctcctcgcctcggcggcggagctcgacgactcgctgcagcac
agcgacctcgagcactacgcctacgtggtgctcatcaccatccccttcgtcgccgccacc
ctgctccgcgacctccccgacgaactcgaccgcctcctgcgcaccctacagcgctacgtc
gacgcccacaagtgccccatcaaccccctcaccctcgtctaccccgaccccgaggcgcag
gactactttgagagctacctgtggaagcagctggcggagctcaaggaggacgggtggcgg
agcggggccatcctgcagccctacgtctccttcgaggaccacctgagcaccgctcctcgc
cacaccctgcccactatcgccctcccgccgtcctccaccgaaaagggctacggctcgctg
agggggcgagtacagaccttccgcctgttcgatgcggcgcggacggagtctcccgacatg
aaggccttcgatcgcttcctccttcaggactacatcgtggacctgctccacttcttcgga
tcggaccacaagacgtgcaccaagttcctgctcaccctccccggcaacttcaactaccac
aacctgctgatcgagacgatattcggtcagctgttcctcttgcccacgccgccctgcaag
ctcatctactacgccgtcgtcatcggcgacctctgcaagggcagtaccgccattccgccc
gtcctcgggttggccatcgacacgctgttcgagagggccgacatgatggacgtggagtgt
gccgagcgcttctgcgactggttctcccaccacctctccaattttgacttcaagtggcac
tggcagaagtgggcgtacgtcctcaagatgaacgaggaggagcccaagcggctggcggtg
cgtgagatcctggagcgcaccatgtggctggcctactacgagcgcgtggcccgcaccctg
cccgaggagttcatcgagctcatgccccgcagaccggcccccttcctcaagtatgccgat
gtcgccgccgaggaccacgaggcctacgcgtcgctgctggccaaggtgagggccaaggag
aagtccgagcagctgcgcccgtggctagactcgctcacctccatctccaccgagaggcgc
ctcgacctcgccctccacgccctcctcgaggccggctgcaagagtttctcccacctcctc
aacgtgctcgaacggtatcacgccctcctgcgtagcctggccggcaccgtgcaggcgcgc
ctggcggtgacgacggcggtgggcgagttttggaagcactcgccacagcacatcatcatc
accctcgagaagctgatgacctaccgcatcgtcgacgcacactccatcgtgcagtggatc
ttctcccaccaagtgctccccttcttcacgcagggttatctgtgggacatcctgcgcaac
acgatcgacaagaccgtcatgcgcacggaggtcatgcgcaaggagctcaaggccgtgcag
cccgaccagcagcccgccctagcagaggcctcgggcgcgtcgacaacagcgaccgcagtg
gacgacgtcaggctgcagcaggctcgcgagagctaccagaccgcgctgcgcgaccagaac
gacctcctgctgctcgtcttccagagcttcgtggtggtgctggccaaccacctggccaac
agccgggagcgagatgccgacccctacgacgcctggtaccgctcggccatgggccacttc
aaggaggtcgcccgaaggtaccatcgggaggccaaggctctgggcgcacccctggccgac
gcgtttgcgcagagctccgacccgcgcatcaccgacgtcctcacccacctccaccagttc
tag
DBGET
integrated database retrieval system
