Acanthamoeba castellanii: ACA1_198540
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Entry
ACA1_198540 CDS
T02667
Name
(RefSeq) RecF/RecN/SMC domain containing protein
KO
K22804
structural maintenance of chromosomes protein 6
Organism
acan
Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acan03400
]
ACA1_198540
DNA repair and recombination proteins [BR:
acan03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
ACA1_198540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
SMC_hinge
AAA_21
DUF16
Fusion_gly
ATG17_like
AAA_29
KASH_CCD
DUF1664
Crescentin
ABC_tran
HMMR_N
Motif
Other DBs
NCBI-GeneID:
14920457
NCBI-ProteinID:
XP_004341725
UniProt:
L8H4I8
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MQQTEAEVGIIEMIKLENFMCHRHLELKLGPNINFIIGQNGSGKSAVLVALTVCLGAKAG
FTNRGKKITNFIRGDASSASVSVTLRNRGAEAYKPDLYGKTITIIRTIARSGSSGYKVKS
DSGKTIATTRREVLMVMEQFNIQIENPCVILMQDTSRAFLNASKPAEKYKFFLSATQLQQ
ISDDYRTVDVKLNGMKQTLENKQDVLPDLKKRVQELEHQFREVAKLRDLESQVRKMKGHL
IWAQLQGREKELAELREKVEARQREIDKNDQVLDKIKNATQKLTEKYEARQKLVDETGAQ
IRAATAEVETYRTQIGEIKRGMSHHQNTVKDLRKRRDELALRIRKLQEFISDVQEKAMRD
TQAEKLERQERIAALQAALQAQHEKAEAMDQELAEHERQRQSIDAELKDLTAKEREVVQE
AQKLEGQIRTLELQKADRTRCFGRNMPALLDAINRERRWQKKPIGPLGLCLTIKDDQWAT
AIETALGRTMDAFVVDNHHDEKILKEIGRRVGQVPDMYVQRFQDRVYHIPDNALPPPHLT
TVLSQLQADEVMVYNCLIDQRQIDNIILIPDRQQASQIMFRQRPPNAREGYLPDGSRLLV
RGGAEVFNAGNTRARRLGRNFEEQIRDAHVALEHKQKEAAHFRPRVQELRSAADALRKQR
AALKRDEGRLTADIHELQSVREEAPPDISEAQTSLEGFLKTKEELEAELAKAMEVAGQVP
EELGPLQDKFAEKKAEIENLAARSEQIAAKLTSVHKNITTIAAREKQMVLNKEKLMQSKL
EEETSLAEQRAALDEEMRRAEQAVPRPEEDLPPPAHLQREIQKMEARIRSQTDGQRSPAE
ITREFKAAKKAYDEATFKVQLLSSLLELLENDLRDRLNKWLLFRRSIANRTTFHFHGFLS
RKGYAGSLSFDHQHRHLDIEVQLDAAQGGPQGARDTRTLSGGERSFSTVALLLSLWEAME
SPFRAMDEFDVFMDAVNRHLSLKLLIESARQQRHRQFIFITPHDLTSVASGPDVRVNRMR
DPERADIVGIGAQQTILDQYTQS
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaaacggaagccgaggtgggcattattgaaatgatcaagctcgagaacttcatg
tgccatcgtcacctggagctgaagctgggacccaacatcaacttcatcattggccaaaat
ggaagcggtaagagcgccgtgctggtcgcactcactgtgtgcttgggagcaaaggctggc
ttcaccaatcgtggaaagaagattaccaacttcatccgtggagacgccagctcggcctct
gtatctgtgacgctgcgcaatcgtggcgcggaggcctacaagcccgacctctacggcaag
accatcaccatcattaggaccatcgcacggtccggctcgtcgggctacaaagtcaagagt
gacagcggcaagacgatcgcgacaacgaggcgtgaggtgctgatggtgatggagcagttc
aacatacagatcgagaacccctgtgtgatcctcatgcaggacaccagcagggcgttcttg
aacgcgagtaagcccgccgagaagtacaagttcttcctgagcgccacccagctccagcag
atcagtgacgactaccgcacagtcgacgtcaagctgaacggtatgaagcaaacgctggag
aataagcaagacgtactgcccgacctgaagaagagggtccaggagctggagcatcagttc
agggaagtggccaagctgcgcgacctcgaaagccaggtccgcaaaatgaagggccacctg
atttgggcgcagcttcaaggccgagaaaaagagctggccgagttgcgcgagaaggtcgag
gcccgccagcgcgagatcgacaagaacgaccaggtcctggacaagatcaagaacgcgacg
caaaagctcacggagaagtacgaggcccggcagaagctggtggacgaaaccggcgcgcag
atccgtgcggccaccgcggaggtcgagacctaccgcacccagatcggcgagatcaagcgc
ggcatgagccaccaccagaacacggtcaaggacctgcggaagaggcgcgacgagctggcg
ctgcgtatcaggaagctgcaggaattcatcagcgacgtgcaggagaaggccatgcgcgac
acacaagcggagaagctggagaggcaggagaggatcgcggcgctgcaggcggcgttgcag
gcgcagcacgagaaggccgaggcgatggaccaggagctcgccgaacacgagcgccagcgc
cagagcatcgacgccgaactgaaggacctcaccgccaaggagcgcgaggtcgttcaggag
gcacaaaaactcgagggccagatccgcacgctggagctgcagaaggcggaccgcacgcgc
tgcttcggccgaaacatgcccgccctgctcgacgccatcaacagggagcgtcggtggcaa
aagaagcccatcggcccgctgggcctttgcctgacgatcaaggacgaccaatgggcgacg
gccatcgaaaccgcgctcggtcgtaccatggacgcctttgtcgtcgacaaccaccacgac
gagaagatcctcaaggagatcggacggcgcgtggggcaggtgccggacatgtatgtgcag
cggttccaagaccgggtctaccacataccggacaatgcgctgcctccgccccacctcacc
accgtcctctctcagctccaggccgacgaagtcatggtgtacaactgcctgatcgatcag
cggcagatcgataacatcattctcatcccggatcgacagcaggcctcacagatcatgttc
cgacaacggccgccgaacgcgagagagggctacttgccggacggctcgcgactgctggtg
cgcggcggcgctgaagtgttcaacgccggaaacacgcgcgcgcggaggctcggccgcaat
ttcgaggagcagatccgggacgcccacgttgcgctcgagcacaagcagaaggaggccgcg
cacttcaggccgcgcgtgcaggagctgcgaagcgctgccgatgccctccgtaagcaacgg
gcggcgctcaagcgggacgagggtcggctcacggccgacatccacgagctccaatcggtg
cgagaggaggccccgcccgacatctccgaagctcagaccagtctcgagggttttctgaag
acgaaggaggagctcgaggccgagctggccaaggccatggaggtggccggccaggtgccg
gaggagctggggccgttgcaggacaagttcgccgagaagaaggccgagatcgagaacctg
gccgcccgcagcgaacagatcgccgccaagctcacgagcgtgcacaagaacatcaccacc
atagcggcgagggagaagcagatggtgctcaacaaggagaagctgatgcagtccaagctg
gaggaggagacgtcgctggcggagcagcgcgccgcgctggacgaggaaatgcgccgggcc
gagcaggccgtcccgcggcccgaggaggacctgccgccgccggcccacctccagcgcgag
atccagaaaatggaggcccgcatccgctcgcagacggacggccaacggagtccggcggag
atcacgcgcgagttcaaggcggccaagaaggcgtacgacgaggccacgttcaaggtgcag
ctgttgagcagcctgctcgaactcctcgaaaacgacctcagggatcgtctgaacaagtgg
ctcctgttccgtcgctccatcgccaaccggacgaccttccacttccacggattcctgagc
cgcaagggctacgccgggtcgctctcgttcgaccaccagcaccgccacctggacatcgaa
gtgcagctcgacgctgctcagggcggtccgcagggcgcacgcgacacgcgaaccctctcc
ggcggcgaacgctccttctccaccgtcgctctcctgctctccctgtgggaagcgatggag
tcgcccttccgtgcgatggacgagttcgacgtgttcatggacgcagtgaaccgccacctg
tcgctcaagctgctgatcgagtcggcccgacagcagaggcaccgccagttcatcttcatc
acgccacacgacctcacctccgtcgcgtcgggacccgacgtgcgggtgaaccgcatgcgc
gaccccgagcgagccgacatcgtcggcatcggcgctcagcagaccatcctcgaccagtac
acccagtcttga
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integrated database retrieval system
