KEGG   Acanthamoeba castellanii: ACA1_198580
Entry
ACA1_198580       CDS       T02667                                 
Name
(RefSeq) transducin family protein
  KO
K14793  ribosomal RNA-processing protein 9
Organism
acan  Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:acan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:acan03009]
    ACA1_198580
Ribosome biogenesis [BR:acan03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    ACA1_198580
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_Vps41 WDR90_beta-prop_4th ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_DCAF4 PQQ Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_SPT8
Other DBs
NCBI-GeneID: 14920461
NCBI-ProteinID: XP_004341729
UniProt: L8H329
LinkDB
Position
Unknown
AA seq 480 aa
MADPFFMSDPAARKRKRTKASDDEENEEEGGALDLSEEEGSEQEEEQTEEDRFAHETPDE
TRLRLAERYVRKLEALNSAKRGDEDDDEEEDEEELNTRVHKRLKQDVLEASGRHRRRLAH
EVAARDVAAAEAGIRTIRGHQLPLTCVALADDEKTAYTGSKDGTIIQYDVETGKRLWRGG
RAPRREANEKASKGKGRGKKGKQQMKSDKSKGHVGHVLAIAVSSDGRMLATGGDDRLVHL
WDTRTNTQIDTFSGHRQAVTGLTFRQGGQELYSASADATVKVWSTAQMSYVETLFGHQAP
VTSIDCLGQERPLTAGGFDRSIRLFKVAEETHLVWKGHTAPIDGAAYLTDQLYATVSQDG
SLSLWDLGLKKPRSTVPNAHAGRWVTAVAACRQSDLFATGSSDGVVRFWSAPPAGVGKVE
QVGTATAAGFVNGLAIAPSGRFALAALGTEPRMGRWDRQPDARNVLAVLPLIPAPHPDHP
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggctgatcccttcttcatgtccgatcccgccgcccgcaagcggaagcgtacaaaggca
agcgatgacgaagaaaatgaggaagaaggaggtgcgctggacctgagcgaagaagaggga
agcgaacaagaggaggagcagaccgaagaggaccgctttgctcacgagacgcccgacgag
acgcgcctgcgactggccgagcgctacgtgcgcaagctggaggccctcaactcggccaag
cgcggcgacgaagacgacgacgaggaggaggacgaagaggagctcaacacacgcgtccac
aagcgcctcaagcaggacgtgcttgaagcctccggacgtcatcgccgccgcttggcccac
gaggttgcggcgcgagatgtggcggcggccgaggcgggcatccgaaccattcggggccac
cagctgcccctcacctgcgtggcgctggccgacgacgagaagaccgcctacaccggctcc
aaagacggcacaatcattcaatacgacgtggaaacgggcaagcggctgtggcgaggcggt
cgggcgccgaggagggaggccaacgaaaaggcgagcaaggggaagggccggggcaagaag
gggaagcagcagatgaagagcgacaagtccaaggggcacgtggggcacgtgctggcgatc
gcggtcagctccgatggacggatgctggccactggcggcgacgaccggctcgtccacctg
tgggacacccgcaccaacacccagatcgacaccttctccggccaccgacaggccgtcacc
ggcctcacgttccgacagggcggtcaggaactgtacagcgcgtcggccgatgcgacggtc
aaggtgtggagcacggcccagatgtcctacgtcgaaaccctgttcggacaccaggcgccc
gtcacctccatcgactgcctgggccaggagcggcctctcaccgccggcggattcgaccga
tcgattcggctcttcaaggtggcggaggaaacacatctggtgtggaagggacacacggcg
ccgatcgacggcgcggcctacctgacggaccagctctatgcgacggtgtcgcaggacggc
tcgctctccctgtgggacctgggtctcaagaagccccgctcgaccgtgcccaacgcccac
gccggccgctgggtcaccgccgtcgccgcctgccgccaatccgacctcttcgccacggga
tccagtgacggagtggtgcgcttctggagtgcgccgcccgcgggagtaggcaaggtggag
caggtgggcacggccacggcggctggattcgtcaacgggctagccatagcgccctcgggc
cgcttcgccctggccgcgctgggcaccgagccccgcatgggccgctgggaccgccagccc
gacgcgcgcaatgtgctcgctgtcctccccctcatccccgccccccatccagaccaccca
taa

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