Acanthamoeba castellanii: ACA1_198580
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Entry
ACA1_198580 CDS
T02667
Name
(RefSeq) transducin family protein
KO
K14793
ribosomal RNA-processing protein 9
Organism
acan
Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acan03009
]
ACA1_198580
Ribosome biogenesis [BR:
acan03009
]
Eukaryotic type
90S particles
Other 90S particles
ACA1_198580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_SCAP
Beta-prop_EIPR1
Beta-prop_Vps41
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_DCAF4
PQQ
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
14920461
NCBI-ProteinID:
XP_004341729
UniProt:
L8H329
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MADPFFMSDPAARKRKRTKASDDEENEEEGGALDLSEEEGSEQEEEQTEEDRFAHETPDE
TRLRLAERYVRKLEALNSAKRGDEDDDEEEDEEELNTRVHKRLKQDVLEASGRHRRRLAH
EVAARDVAAAEAGIRTIRGHQLPLTCVALADDEKTAYTGSKDGTIIQYDVETGKRLWRGG
RAPRREANEKASKGKGRGKKGKQQMKSDKSKGHVGHVLAIAVSSDGRMLATGGDDRLVHL
WDTRTNTQIDTFSGHRQAVTGLTFRQGGQELYSASADATVKVWSTAQMSYVETLFGHQAP
VTSIDCLGQERPLTAGGFDRSIRLFKVAEETHLVWKGHTAPIDGAAYLTDQLYATVSQDG
SLSLWDLGLKKPRSTVPNAHAGRWVTAVAACRQSDLFATGSSDGVVRFWSAPPAGVGKVE
QVGTATAAGFVNGLAIAPSGRFALAALGTEPRMGRWDRQPDARNVLAVLPLIPAPHPDHP
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcccttcttcatgtccgatcccgccgcccgcaagcggaagcgtacaaaggca
agcgatgacgaagaaaatgaggaagaaggaggtgcgctggacctgagcgaagaagaggga
agcgaacaagaggaggagcagaccgaagaggaccgctttgctcacgagacgcccgacgag
acgcgcctgcgactggccgagcgctacgtgcgcaagctggaggccctcaactcggccaag
cgcggcgacgaagacgacgacgaggaggaggacgaagaggagctcaacacacgcgtccac
aagcgcctcaagcaggacgtgcttgaagcctccggacgtcatcgccgccgcttggcccac
gaggttgcggcgcgagatgtggcggcggccgaggcgggcatccgaaccattcggggccac
cagctgcccctcacctgcgtggcgctggccgacgacgagaagaccgcctacaccggctcc
aaagacggcacaatcattcaatacgacgtggaaacgggcaagcggctgtggcgaggcggt
cgggcgccgaggagggaggccaacgaaaaggcgagcaaggggaagggccggggcaagaag
gggaagcagcagatgaagagcgacaagtccaaggggcacgtggggcacgtgctggcgatc
gcggtcagctccgatggacggatgctggccactggcggcgacgaccggctcgtccacctg
tgggacacccgcaccaacacccagatcgacaccttctccggccaccgacaggccgtcacc
ggcctcacgttccgacagggcggtcaggaactgtacagcgcgtcggccgatgcgacggtc
aaggtgtggagcacggcccagatgtcctacgtcgaaaccctgttcggacaccaggcgccc
gtcacctccatcgactgcctgggccaggagcggcctctcaccgccggcggattcgaccga
tcgattcggctcttcaaggtggcggaggaaacacatctggtgtggaagggacacacggcg
ccgatcgacggcgcggcctacctgacggaccagctctatgcgacggtgtcgcaggacggc
tcgctctccctgtgggacctgggtctcaagaagccccgctcgaccgtgcccaacgcccac
gccggccgctgggtcaccgccgtcgccgcctgccgccaatccgacctcttcgccacggga
tccagtgacggagtggtgcgcttctggagtgcgccgcccgcgggagtaggcaaggtggag
caggtgggcacggccacggcggctggattcgtcaacgggctagccatagcgccctcgggc
cgcttcgccctggccgcgctgggcaccgagccccgcatgggccgctgggaccgccagccc
gacgcgcgcaatgtgctcgctgtcctccccctcatccccgccccccatccagaccaccca
taa
DBGET
integrated database retrieval system