Acanthamoeba castellanii: ACA1_240350
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Entry
ACA1_240350 CDS
T02667
Name
(RefSeq) nuclear pore complexassociated protein TPR, putative
KO
K09291
nucleoprotein TPR
Organism
acan
Acanthamoeba castellanii
Pathway
acan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ACA1_240350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_240350
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
ACA1_240350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
14913950
NCBI-ProteinID:
XP_004335371
UniProt:
L8GKU7
LinkDB
All DBs
Position
Unknown
AA seq
1990 aa
AA seq
DB search
MEGEDSPPMTSAKPEDVNAAEGDVTFLAEGEWDTYKDDPLAVEVKEKAEKKIIALHERIR
ALDAEMIDVKVKNGIFPAELQCCPIDTNQSAYKFLVPTRAEHLFIELESKFEAVSAELAE
TKASQHKLADEHQDTSVREKQLEDRVHDLVKALGEKEAKLTELTKSTDELHSERRTMLNS
INEKNSRIKLLEEEVRAMTEGRVDSASASSELNIRVQRQEAELLSLQLKSSRLDQENASL
IKHNKWLEEELQSRSDELLQTRKDKSSQLFERAAQAEEAEAENKILKESVNTLRSRNVEL
EALVGKYMDDIRSAQDELQLTKEQFESEINIRNRLVQLHEDKATEAGSKAKELEVVVEQA
KASMSSIKQQYEEQLSRVLEEKHKIADKYAKAADEVKELKQRLSTINASVQAGSGSPLPP
GANLALTLQHKYEEATKTTLLLKNENRRINSYLNQILKEVEEKAPIFEEQQEAYEKMQTE
YTQMSQSLEQAMREMEVAKEQAEALKKENNDLAKQVQQLLAECMEKTGYPPRPAPPSSVS
TASLESTDTIIPAELVTFKDIQEIQQNNRRLLRVVHKLEAEVDKKVELKTQEKMQEVYKR
LEQLKAERAQITEKLQVVMRQRDMFKAIADLRQSPAAAVPSDPAIPEPSSNERRALAHVL
TEHRFFELKADDSRMDFKPLYEDLQHEFDNYRKEKQKDDRDYQERIDKQREEMSQLRSEV
VKAQSRQTFAEQRYEELKQTAEGQTNELKALRTRNAEYSASVGAHQMQIETIRQEMEVVQ
QESRRLREQVGILRAEKEALTKAEKRLVDDITGLRQEVAHNQSLSQNLQKFLAAREASED
ALKKSSSQEVERLRSELQHARKVREEDDERIRDQLRAAELSNSELSQKLSEREKEMQQLR
EATIKHEATVQTLNNQIRSLQQQLLESERKGQRGVLRPAAEGAATGEGISREAELVIAGL
REELSQEREHLAHYRVIADDREKAMKELQETNDQYRATIEQRLKDTEAALKQSKETLAEL
HVKYEEQQAAFATYQETAGQEIENLHAQVTKVEKEKREMHSQLEEALSKEQALRQDLHVH
KEMCAEAQNNYDREVMIHANSLSLLSKIKEDLSKQSHATREAVEKYEQLASATKIEKATW
EEEQKSHQKELDELQARVADLKGQNEVLHAHLQSLMSKSAQIQAAAGETIEELRQLVGYL
KKEREIVECKHELAHQEATRYRQQWEHATRALDEVRGKLHAEQERTAQHLRSEAEHKDLV
GQIGQLNLYRESNAMLRAILTLKLATRSEVEKLQAEVREWKTKYDELQKQVNPLLAGKRE
LVATIDGLKLEIKSLVEERDRWKKRMEDYQANIKRIDPEEHRKITEKAQQLEEELATTKT
QLEEAQKELARLRQEFDEKTVELQRAVNYGKTAKPLLDKLKAALDAQKEQTEKNAQACAE
ATTKLESCLKQLAEKDRANAELTAEKEQLNKTLHEKDQKMEKIKILLRRQKQQQQLGGAG
AAATPPATPPTFVPAPEPEAPAAPSSPAVPLATATATLTGKRGRPEAPEAAAGAPVPPLR
AAATNNKRARVQEEAPTAEASAEGSVFATPPPSSDDMVLEAEKEKPAAAAPAAAPAPVYV
AARARPLEAVPMGNRPGAPPSPTMVAKGPAQPSTPPTTATTGGDTPFPAGGRGTRGRGRG
QMRGAVEQAPARGRGAARGGRGGSPAPATAAPVTPPPAAAATTPTPTPLSRAFAAAGMKR
KATEEPATPEAEPAATTAVAAAPAVPSGPQGRWAKRGGLRQPPAAAAAPVSAPAQVPAAA
AAAEPAAPAPAVVAAPAAPVEPVALAPPAAPAPTLVSITDPSVTIPTPSVFSLPETPKPA
AAATAEAVPTPAAPAQVQEEATAFPVPPTFSRVEAPTAMETEEAPAPPKVQAEPEQTTDD
EGEEEQEQEEKRDQEEEEVEEREEEGEEGERSEAEEGSGEEEEGEGEGDGGEDASNSEDE
DEDEDGGSVF
NT seq
5973 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgaggattcaccgcccatgacgtcggcaaagccggaggacgtaaatgcggca
gagggggacgtcaccttcttggctgagggcgaatgggacacatacaaggatgatcccctc
gcagtggaggtgaaggagaaggctgaaaagaagatcatcgcgctgcacgagcgaatccgt
gcactcgatgccgagatgatcgacgtcaaggtcaaaaatggtatattccctgctgaattg
cagtgttgtccgattgataccaatcaatcggcttacaaatttcttgtgcccacccgcgca
gagcatttgtttattgaattggaaagcaaatttgaggcggtaagcgcggagctcgccgag
accaaggcctcccagcacaaactcgcagacgagcaccaagacacatctgtgagggagaag
cagttggaggaccgcgtgcacgacctcgtcaaggccctcggcgagaaggaagccaagctg
accgagctcaccaagtccaccgatgagctgcacagcgagcggaggaccatgctcaactcc
atcaacgaaaagaactccagaatcaaactcttggaggaggaggtacgcgccatgacggag
ggcagagtggactctgcgagtgcgtcgtccgagctcaacatccgagtgcaaaggcaggag
gccgagctgctctctctccagcttaagtcttcgcgtctcgatcaagagaatgccagcttg
atcaagcacaacaagtggcttgaagaggagctgcagagcaggtccgatgagctgctgcaa
acgcgcaaggacaagtcttcgcagttgtttgagcgagctgctcaagccgaagaggccgag
gccgagaacaagattctcaaggagagcgtcaacacgctccgttctcgcaacgtcgagctt
gaggcgcttgtgggcaagtacatggacgacatccgatcggcccaggacgaacttcaactc
accaaggagcaattcgagagtgagatcaacatcaggaacaggctggttcagcttcacgaa
gacaaggccaccgaagccggcagcaaggccaaggaactcgaggtggtggtggagcaggcc
aaggcctccatgtcgtccatcaagcagcagtacgaggagcagctgtcgcgagtgctcgag
gaaaagcacaagattgccgacaagtacgccaaggctgccgacgaggtcaaggagctcaag
cagcgtctctcgacaatcaacgcctcggtgcaggctgggtcgggctcccctctccctccg
ggtgccaacctggcgttgaccctgcagcacaagtacgaggaggccacgaagaccacgctg
ctgctcaagaacgagaacaggcgcatcaacagctacctcaaccagattctcaaggaggtc
gaggagaaggcgcccatcttcgaggagcagcaggaagcgtacgaaaagatgcagacagag
tacacccagatgtcacagagcttggagcaagccatgcgagagatggaggtggccaaggag
caggccgaggccctcaagaaggaaaacaacgacctggccaagcaggtccagcagcttctg
gccgagtgcatggaaaagaccggatatcctcctcgtcctgcgcctccctcgtcggtcagc
accgcctcactggagagcaccgacaccatcatcccggccgagcttgtcaccttcaaggac
atccaagagattcagcagaacaaccgtcgactgcttcgcgtggtccacaagttggaggcc
gaggttgataagaaggtggagctgaagacccaggagaagatgcaggaggtgtacaagcgc
ctggagcagctcaaggccgaacgggcgcagatcacggagaagcttcaggtggtcatgcga
cagcgcgatatgttcaaggccatcgccgatctgcgtcagtctcctgccgcagccgttccg
tccgaccccgccatccccgagccctcgagcaacgagcggcgcgctctcgcacacgtacta
accgagcaccgcttcttcgaattgaaggccgacgacagtcggatggacttcaagcccctc
tacgaagatctccagcacgagttcgacaactaccggaaggagaagcagaaggacgacagg
gactaccaggagcgcatcgataagcagcgggaggaaatgagccagctccgcagcgaagtc
gtcaaggcccagtcccgtcagacctttgccgagcagagatacgaggagctgaagcagacc
gccgaaggacagaccaatgagctcaaggcactgcgtacgcgcaatgccgagtactcggcc
tcggtcggtgctcaccagatgcaaatcgagaccattcgtcaggagatggaggtcgtgcag
caggaatcgaggaggctgcgcgagcaagtgggcatcctgcgcgccgagaaggaggcgctg
accaaggccgaaaagcgactggtcgacgacatcaccgggctccgacaggaggtcgcccac
aaccagtcgctgtcccagaacctccagaagttcctggccgcccgggaggccagcgaagac
gcgcttaagaagagctcctcccaggaggtcgagcgccttcgctccgagctccaacacgca
cgcaaggtcagggaggaggacgacgagcgtatcagagaccagcttcgcgcggccgagctg
agcaacagcgagttgagtcagaagctgtccgaaagggagaaggagatgcaacagctgcgc
gaggccacgatcaagcatgaggccactgtccagacgctcaacaaccagattcgctctctc
caacagcagctcttggaaagcgagagaaagggccagcgtggcgtgcttagacctgctgcc
gagggagcagccactggagagggcatctcgcgcgaggccgagttagtcattgccgggctg
cgcgaggagctcagccaggagcgtgagcacctggcccactaccgtgtcattgccgacgac
agggaaaaggcgatgaaggagctccaggagacgaacgaccagtaccgcgcgacgatcgag
cagcgcctcaaggacaccgaggcagcgctcaagcagtccaaggagaccctcgccgagctc
cacgtcaagtacgaggagcagcaggcggcctttgccacctaccaggagaccgccggccag
gagatcgagaacctgcacgcccaggtcaccaaggtggagaaggagaagcgggagatgcac
tcgcagctcgaggaggccctcagcaaggagcaggccctgcgacaggacctccatgtgcac
aaggaaatgtgcgccgaggcccagaacaactacgacagggaggtcatgatccacgccaac
tcgctgtcgctcctctccaagatcaaggaggacctttcgaagcagtcgcatgccacccgt
gaagcggtagagaaatacgagcagctggcttccgccaccaagatcgaaaaggctacctgg
gaagaggaacagaagtcccaccagaaggagctcgacgagctgcaggcccgcgtcgccgac
ctcaagggccaaaacgaggtgctgcacgcgcacctccagtcgctcatgtccaagtcggcg
cagatccaagccgccgcgggcgagaccatcgaggagctccgacagctcgtgggctacctc
aagaaggagcgggagatcgtcgagtgcaagcacgagttggcgcaccaggaggccaccaga
tatcgccagcagtgggagcatgccactcgtgctctggacgaggtgcgaggcaagctgcac
gccgaacaagaaaggaccgcccagcacctgcgctctgaggccgagcacaaggacctcgtg
ggacagatcggtcagctgaacctgtaccgcgagtccaacgccatgctcagagcgatactc
accttgaagctggccaccaggtcggaggttgagaagctgcaggccgaggtgcgagagtgg
aagaccaaatacgatgagctgcagaagcaggtcaacccgctccttgccggcaagcgggag
ctggttgccaccattgacggtctcaagctcgagatcaagtctctggtggaagagcgcgac
aggtggaagaagaggatggaggactaccaggccaacatcaagaggatcgaccccgaggag
cacagaaagatcacggagaaggcgcagcagctggaggaggagctcgccaccaccaagaca
cagttggaggaggcccagaaggaattggccaggctcaggcaagagttcgatgaaaagact
gttgagcttcaacgggccgtgaactacggcaagaccgccaaaccacttctcgacaagctc
aaggcggcactggacgcccagaaggagcagaccgagaagaacgcacaggcctgtgcggag
gcaacgaccaaactcgagtcgtgcctcaagcagctggccgagaaggatagagccaacgcg
gagctgacggcggagaaggagcagctgaacaagacgctccacgagaaggaccaaaaaatg
gagaaaatcaagattctgcttcgccgccagaagcagcagcagcagctgggcggcgccgga
gctgcggccactcctcccgcgactcctcccaccttcgtccctgcgcccgaacccgaggca
cccgccgcgcccagctcgcctgcggtgccgttggccacggccacggccacgctgacgggc
aagcgcggacggcccgaagcgcccgaggcggcggcgggagccccggtgcctcccctgcgc
gcggccgcgaccaacaacaagcgagcccgcgtccaggaggaggcgcccaccgcagaggcc
tccgcggagggttccgtcttcgccactccgccgccgtcgtccgatgacatggtgctcgag
gccgagaaagagaaacctgccgccgccgctcctgccgccgctcctgctcccgtctacgtg
gccgctcgcgcccgcccgctcgaagcggtccccatggggaaccgccctggcgcaccgccg
agcccgacgatggtggccaagggtccggcccagccctcgacgcctccgaccacggcgacg
actggtggtgataccccgttccctgcaggcggccgcggcacgcgcgggcgtggcagaggc
cagatgcgcggcgcagtcgaacaggcgcccgctcggggacgaggagccgcacgcggcggc
cgcggtggcagccccgcccccgccactgctgcgcctgtgaccccgccgcccgcggctgca
gccaccaccccgacgcccacgccgctgtccagggccttcgccgctgccggcatgaagcgg
aaggccaccgaggagcccgccacaccggaggccgaacccgctgcgaccactgctgtcgct
gctgcgccggccgtgcctagcggtccgcagggtcgatgggcgaaacgaggcggccttcgc
cagccgcccgccgctgccgctgccccggtctccgccccggcgcaggtcccagcggccgcc
gccgccgccgaacccgctgccccggccccggccgtcgtggccgcacctgctgcgcctgtc
gagccggttgccctggccccgcccgccgcccccgcgccgacgctcgtatccatcaccgac
ccgtcggtcaccattcccacgccctcggtcttcagtctgccggagacgcccaagcccgcc
gccgccgccaccgccgaggctgtacccacgcccgcggctccggctcaggtccaggaggag
gcgaccgcgttcccggtgccgcccaccttcagccgagtggaggcccctacggcgatggag
accgaggaggcaccggcaccaccgaaggtgcaggccgagcccgagcagaccacggacgac
gagggcgaggaggagcaggagcaggaggagaaacgcgaccaggaggaggaggaagtggag
gagagagaagaagaaggggaggagggagaacgtagtgaggcggaagaaggcagtggggag
gaggaggaaggagaaggagaaggcgatggaggcgaggatgccagcaacagcgaagacgag
gacgaagatgaggatggtggcagtgtcttctaa
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