Acanthamoeba castellanii: ACA1_249770
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Entry
ACA1_249770 CDS
T02667
Name
(RefSeq) hypothetical protein
KO
K12878
THO complex subunit 1
Organism
acan
Acanthamoeba castellanii
Pathway
acan03013
Nucleocytoplasmic transport
acan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACA1_249770
09122 Translation
03013 Nucleocytoplasmic transport
ACA1_249770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_249770
03041 Spliceosome [BR:
acan03041
]
ACA1_249770
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
ACA1_249770
Spliceosome [BR:
acan03041
]
Complex C
Other components
EJC/TREX
ACA1_249770
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
ACA1_249770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
14924096
NCBI-ProteinID:
XP_004352651
UniProt:
L8HEE4
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MNYEQTKRFLLTSLRRADASNDLEKAKTAILADLKELHIKKQKPEQPSAAASASAPTTAA
AGASSSSTTDQDVKDILDYALQQRHDKGEGSGGGSKMEVEGTPAATTRKYEDVGLLIDIA
LWLGREKVIESAAPLELVRDFFLSHTIEECQQFFALLEDRADQLSRAIIGDSRANNTLLR
ALSEVRKRLSRTNDLVFAGRILMFMAYAFPLSDKSGVNLKGEANVANVTTMDKEPSPALE
ETPEDIRDLQALLQKEERGRMVSLEEWLEPVIEEMDPEAAIESQYKKINTDKIYVWRAKR
LTFKRSLEYFCTLAKQDATLEDVAKQLLANKGTSTEDGMVLEDREEKRDADVDDVEDKES
VVKIEAKHSEDQEGDQLVSEPDSHDDDSKPPTKTTLEAGEVPTPQVEEEEGDDEKESEVG
EKRKEMPASPLKARDDASSPAVKKRRVANSPLLVTTPGEAKPTTPE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaactacgaacagactaaacgcttcttactgacaagcctgcgtcgcgcggatgcctcg
aatgacctcgagaaggccaaaactgccatcttggccgacctgaaggaactgcacatcaag
aagcagaagcccgaacaaccctctgccgctgcgtctgcatcagccccaacaactgcggct
gccggagcgtcttcgagtagtacgaccgaccaagatgtcaaggacattctcgactacgct
ctccagcaacgccacgacaagggcgagggtagcggtggcggtagcaagatggaagtcgag
ggaacgcctgccgcaacaactcgcaagtacgaagacgtcgggttgctgatcgatatcgcg
ctgtggcttgggcgcgagaaggtgatcgagtctgcggcaccgctggagttggtgcgcgat
ttcttcctgtcccatacgatcgaggaatgccagcagttctttgcgctgctcgaggatcgc
gccgatcagctctctcgggccatcatcggggattcgcgcgccaacaataccctcctgcga
gcgctctccgaggtccgtaagcggctctcccgcacgaacgacctcgtctttgccggtcgc
atcctgatgttcatggcctacgcgttccccctctccgacaagtcaggcgtcaatctcaag
ggtgaagcgaatgtggccaacgtcaccacaatggacaaggagcccagtccagccctcgaa
gaaacccccgaggacatacgagatctgcaggcacttctgcaaaaggaggagcgcggtcgc
atggtgtcgctcgaggaatggcttgagcccgtcattgaggagatggatcccgaggctgcc
atcgagtcccagtacaagaagatcaacacggacaagatctacgtgtggcgggcaaaacgt
ttgaccttcaagcgcagtctcgagtacttttgcacgcttgccaaacaggacgctactctc
gaggacgtggccaagcaactccttgccaacaagggaacttcaacagaagatgggatggta
ctggaggatcgtgaggaaaaacgcgacgccgatgtggatgatgtagaagacaaggagagc
gtcgtcaaaatcgaagccaagcacagtgaagatcaggaaggagaccaacttgtcagcgag
cccgacagtcatgacgacgacagcaagccgcccacgaagactaccctggaggcaggcgaa
gtaccgacaccccaggtcgaagaggaggaaggagacgacgaaaaggaaagtgaggtgggt
gagaagcggaaggagatgcccgcctcgccactgaaggcacgcgatgatgcctcgtcccca
gcggtgaagaagagacgagttgcgaacagcccacttctcgtgacgacacctggtgaggcc
aaacctacaacaccagagtga
DBGET
integrated database retrieval system