Acanthamoeba castellanii: ACA1_252580
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Entry
ACA1_252580 CDS
T02667
Name
(RefSeq) Replication factor C protein
KO
K10755
replication factor C subunit 2/4
Organism
acan
Acanthamoeba castellanii
Pathway
acan03030
DNA replication
acan03410
Base excision repair
acan03420
Nucleotide excision repair
acan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACA1_252580
03410 Base excision repair
ACA1_252580
03420 Nucleotide excision repair
ACA1_252580
03430 Mismatch repair
ACA1_252580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acan03032
]
ACA1_252580
03036 Chromosome and associated proteins [BR:
acan03036
]
ACA1_252580
03400 DNA repair and recombination proteins [BR:
acan03400
]
ACA1_252580
DNA replication proteins [BR:
acan03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
ACA1_252580
DNA Replication Termination Factors
ELG1-RFC complex
ACA1_252580
Chromosome and associated proteins [BR:
acan03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
ACA1_252580
DNA repair and recombination proteins [BR:
acan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
ACA1_252580
Check point factors
HRAD17(Rad24)-RFC complex
ACA1_252580
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
RCF1-5-like_lid
AAA
Rad17
AAA_assoc_2
AAA_16
RuvB_N
AAA_11
ResIII
Mg_chelatase
AAA_24
DUF815
AAA_22
AAA_5
IstB_IS21
TIP49
nSTAND3
Gp44_lid
AAA_7
AAA_25
ATPase_2
Motif
Other DBs
NCBI-GeneID:
14923245
NCBI-ProteinID:
XP_004367569
UniProt:
L8HC38
LinkDB
All DBs
Position
Unknown
AA seq
296 aa
AA seq
DB search
MSKELSFAGAKRAAKIPWVEKYRPKKVDDVAHQEEVVRALKKSLDTGNLPHLLLYGPPGT
GKTSTALAIGHELYGPELFKTRVMELNASDERGINVIRSKVKSFSQVATAAASYNGRQII
DPLASRCAKFRFRPLEGDTMGDKLVAICSQENLHITEEALRTVVSISGGDLRKAITTLQS
VSSLYDEKEVTEDAIVEVAGVIPPKKVDRLMDACASGSFFRLQSAVTDMTMDGYSSALVL
SQMHDRIVDAALSNKQKAEIMKRLAAADQALVDSADEFLQLFDVCAFMMRVYGLKD
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaggagctttcattcgccggggcgaagcgtgcagccaagatcccctgggtggaa
aaataccgtccgaaaaaggtcgacgatgtggcgcaccaggaggaggtggtgcgagcgctc
aagaaatctctggacacaggcaacctgccccatctgctcctctacggcccgcccggcaca
ggtaagacctctaccgcccttgccatcggccacgaactctatgggcctgaattgttcaag
acgcgtgtgatggaactcaacgcatctgacgagcgaggcatcaacgtcatccgttccaaa
gtcaagtccttctcgcaggtggccaccgctgcagcttcttacaacggcagacagatcatc
gatccgctggcctcgcgttgcgccaagttccgattccgaccgctcgagggcgacaccatg
ggtgacaagctggttgcgatctgctcacaggagaacctccacatcactgaagaggcactc
agaacggtggtgagcatatcgggcggtgatttgcgtaaggcgatcacgaccctgcagtct
gtaagcagcctctacgatgagaaggaggtcacggaagacgctatagtcgaggtggccggg
gtgattccacccaagaaggtggaccgactgatggacgcctgcgccagtggttcgttcttc
cgacttcagtctgccgtgacggacatgacgatggacggctactcctctgctttggtgctg
agccaaatgcacgatcggattgtggacgcggcgctcagcaacaagcagaaggcggagatc
atgaagagactcgcggcggcggatcaggcgctcgtggacagtgcagatgaattccttcag
ctgtttgacgtctgcgccttcatgatgcgagtctatggcctcaaggattag
DBGET
integrated database retrieval system