KEGG   Acanthamoeba castellanii: ACA1_252580
Entry
ACA1_252580       CDS       T02667                                 
Name
(RefSeq) Replication factor C protein
  KO
K10755  replication factor C subunit 2/4
Organism
acan  Acanthamoeba castellanii
Pathway
acan03030  DNA replication
acan03410  Base excision repair
acan03420  Nucleotide excision repair
acan03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:acan00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    ACA1_252580
   03410 Base excision repair
    ACA1_252580
   03420 Nucleotide excision repair
    ACA1_252580
   03430 Mismatch repair
    ACA1_252580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:acan03032]
    ACA1_252580
   03036 Chromosome and associated proteins [BR:acan03036]
    ACA1_252580
   03400 DNA repair and recombination proteins [BR:acan03400]
    ACA1_252580
DNA replication proteins [BR:acan03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    ACA1_252580
  DNA Replication Termination Factors
   ELG1-RFC complex
    ACA1_252580
Chromosome and associated proteins [BR:acan03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    ACA1_252580
DNA repair and recombination proteins [BR:acan03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     ACA1_252580
  Check point factors
   HRAD17(Rad24)-RFC complex
    ACA1_252580
SSDB
Motif
Pfam: Rep_fac_C RCF1-5-like_lid AAA Rad17 AAA_assoc_2 AAA_16 RuvB_N AAA_11 ResIII Mg_chelatase AAA_24 DUF815 AAA_22 AAA_5 IstB_IS21 TIP49 nSTAND3 Gp44_lid AAA_7 AAA_25 ATPase_2
Other DBs
NCBI-GeneID: 14923245
NCBI-ProteinID: XP_004367569
UniProt: L8HC38
LinkDB
Position
Unknown
AA seq 296 aa
MSKELSFAGAKRAAKIPWVEKYRPKKVDDVAHQEEVVRALKKSLDTGNLPHLLLYGPPGT
GKTSTALAIGHELYGPELFKTRVMELNASDERGINVIRSKVKSFSQVATAAASYNGRQII
DPLASRCAKFRFRPLEGDTMGDKLVAICSQENLHITEEALRTVVSISGGDLRKAITTLQS
VSSLYDEKEVTEDAIVEVAGVIPPKKVDRLMDACASGSFFRLQSAVTDMTMDGYSSALVL
SQMHDRIVDAALSNKQKAEIMKRLAAADQALVDSADEFLQLFDVCAFMMRVYGLKD
NT seq 891 nt   +upstreamnt  +downstreamnt
atgagcaaggagctttcattcgccggggcgaagcgtgcagccaagatcccctgggtggaa
aaataccgtccgaaaaaggtcgacgatgtggcgcaccaggaggaggtggtgcgagcgctc
aagaaatctctggacacaggcaacctgccccatctgctcctctacggcccgcccggcaca
ggtaagacctctaccgcccttgccatcggccacgaactctatgggcctgaattgttcaag
acgcgtgtgatggaactcaacgcatctgacgagcgaggcatcaacgtcatccgttccaaa
gtcaagtccttctcgcaggtggccaccgctgcagcttcttacaacggcagacagatcatc
gatccgctggcctcgcgttgcgccaagttccgattccgaccgctcgagggcgacaccatg
ggtgacaagctggttgcgatctgctcacaggagaacctccacatcactgaagaggcactc
agaacggtggtgagcatatcgggcggtgatttgcgtaaggcgatcacgaccctgcagtct
gtaagcagcctctacgatgagaaggaggtcacggaagacgctatagtcgaggtggccggg
gtgattccacccaagaaggtggaccgactgatggacgcctgcgccagtggttcgttcttc
cgacttcagtctgccgtgacggacatgacgatggacggctactcctctgctttggtgctg
agccaaatgcacgatcggattgtggacgcggcgctcagcaacaagcagaaggcggagatc
atgaagagactcgcggcggcggatcaggcgctcgtggacagtgcagatgaattccttcag
ctgtttgacgtctgcgccttcatgatgcgagtctatggcctcaaggattag

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