Acanthamoeba castellanii: ACA1_254420
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Entry
ACA1_254420 CDS
T02667
Name
(RefSeq) Dcp1 family decapping family protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
acan
Acanthamoeba castellanii
Pathway
acan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACA1_254420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_254420
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ACA1_254420
mRNA degradation factors
5'-3' decay
Decapping complex
ACA1_254420
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
Motif
Other DBs
NCBI-GeneID:
14923329
NCBI-ProteinID:
XP_004367651
UniProt:
L8HB12
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MEIPFSPFWRLFSPPFSSGTTNGHVEQNNASRTQMALNLAVLQRLDAKINQILATAGHVA
LYKFLPATQAWERKEVEGSLFVVERTEEPLHTIVVLNRISIENFCEPITTGLQMRVSEPY
LLLRNYKNETTGVWFYSKDEQHKISQAVRALLDAKASSASSSTSSTTSKKPAKASVDKEK
TAAAAASTKTPADKAAGADKTSQASSPAPQAAAAGPPGLQQPSAAAAAVPPAVSASTPSP
SAGYAPLGGQAAGASILSAVLGGIVAGSTGAGSTPSYAQAVARDSTSSTSSSSLPSVSSS
SSPAVAVAAAAPPAVSAPTPAKPEQEPPRDHGSNAAGAALLNLLQPSADRDREPLPPPQQ
NGSLVQQPHPHPHHHLHLQHPHPQFPPHLLHAQQQPVPPHFGQPAPHHLPPMHPGQQHPH
QPLLPHHPIMRQPMPPPQQLQQQQQPPHPQQLQQPLVPQQMHHPARSVASKQHLRSVLLS
LANDDSFIDMVYECYMTQLAHGASQKTAPS
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atggaaattccattttcccctttttggcggcttttttctcctcctttttcttcgggcaca
acaaacggtcacgtagaacaaaacaacgcaagtagaacacaaatggcattgaatctcgcg
gtgcttcagcgattggacgccaagattaaccagatcttggccactgccggccatgtggcc
ctctacaaatttcttcccgctacacaagcctgggagaggaaggaggtagaaggatcgctc
ttcgtcgtcgagcgaaccgaagagccgctacacaccatcgtcgtgctcaaccgtatcagc
attgaaaacttctgtgaacccatcacaaccggcttgcagatgcgagtgagcgagccgtac
cttctgctgcgcaactacaagaacgagacgacgggcgtgtggttctactccaaggacgag
cagcacaagatctcccaggccgtgcgggcgctcctcgacgccaaggcctcgagcgcgtcg
tcgtccacgtcctccaccacttccaaaaagcccgccaaggcctctgtcgacaaagaaaag
accgccgccgccgccgcgtcgaccaagacacctgccgacaaggcggcgggcgctgacaag
accagccaagccagcagcccggccccacaggccgccgcagccggcccgcccggcctgcaa
cagccctcggccgccgcagccgccgtaccgccggcagtctcggcctcgacgccgtcgcca
tcggccggctatgcgccgctgggcggccaggcggccggcgcgtcgattctctcggccgtg
ctgggcggcattgtcgctgggtccaccggcgccgggtcgactccgtcctacgcgcaggcg
gttgcccgcgattccacttcttccacctcttcttcttcacttccgtcggtgtcttcttcg
tcctcacccgccgtcgccgtcgctgctgcggcgcctccggccgtcagtgcgcccacgcca
gccaagcccgagcaggagccaccacgggaccacggcagcaacgcagcaggtgcggcgctc
ctcaatctgctgcagccgtccgccgatagagatcgcgagcctctgccgccgcctcagcaa
aacggctcgctcgtgcagcagccgcatccgcatccgcaccaccacctccacctgcagcac
ccccacccccagttcccgccgcacctgctccacgcccagcagcagccggtgccgccccac
ttcgggcagccggcgccgcaccacctgccgcccatgcacccgggccagcagcacccccac
cagccgctcctgccgcaccacccgatcatgcgccagcccatgccccctccgcagcagctt
cagcagcagcagcagccaccgcacccgcagcagcttcagcagccgttggtgccgcagcag
atgcaccacccggcccggagcgtcgccagcaagcagcacctccgctcggttctactctca
ctcgccaacgatgacagtttcatcgacatggtgtacgagtgctacatgacccagctggcc
cacggcgccagccagaagacagcgccctcctag
DBGET
integrated database retrieval system
