Acanthamoeba castellanii: ACA1_270320
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Entry
ACA1_270320 CDS
T02667
Name
(RefSeq) histidine triad domain containing protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
acan
Acanthamoeba castellanii
Pathway
acan03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACA1_270320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acan03400
]
ACA1_270320
Enzymes [BR:
acan01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
ACA1_270320
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
ACA1_270320
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
ACA1_270320
DNA repair and recombination proteins [BR:
acan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
ACA1_270320
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
ACA1_270320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
zf-C2HE
HIT
Macro
Motif
Other DBs
NCBI-GeneID:
14920345
NCBI-ProteinID:
XP_004341643
UniProt:
L8H2U4
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MSGSRAAVLKSEDGKITVPLPLGTTALGRTNLKLDDKRNGVNACYVKGTEEETYVGKGEE
QALASGDTICFCGQSYPFVLTFLSITTTTPSAISSTNKRKLEEETRGEEEEEQEEEKEDT
AQAQKRRKVEPKGGGGALPAVDAWRSRPSAPASSNTTWSAPHKHVAAFLEEHDDPRIRLY
AVDITESATLAAIRKCWKGRDARFQIRVANITKMKTEGIPCRVIANAANEWYGRGAPSRQ
LSFSAMGSGVNLAINKAAGPALDKETKARYKGVHHVVHVMAPNMNPQRNNCLHDDYTKGD
RLLGQCYSSLLTTFWDLVSGSPTTKASAQAEDEIEEDFDEANFAPRPTETKKSAPAVPKS
SANAFSMLMTAKKPEAEPKGGKAASEGASAPKAPARAGGWSDALTPYATHPEKVPPNIMH
QYDDKTVCIFDKFPKVAFKHLLVLPRRLIPGYGNLTADDVPLLKEMQKRGQMTVEQLTSR
YGTLKFRLGFHAVPSMRQLHDFDSEHLKTKKHWNSFTTEFFIPADKFIKTLETDGSIHFE
KARYEAWLEAPLKCHVCHQSQKTMPALKGHLLSHA
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagcggatcaagagccgcggtgctgaaatccgaagatggaaagataaccgtgccgctt
ccgttgggcacgaccgcattgggccgcacaaatctcaagttggatgataagcgcaatggc
gtgaatgcgtgctacgtcaagggaaccgaagaggagacgtacgtgggcaaaggcgaagag
caggcactggcctcgggcgacaccatctgcttctgcggccagtcttaccccttcgtcctc
acattcctgtccataaccacgaccacaccatccgcgatttcttccacgaacaaaaggaaa
ttggaggaggagacgaggggagaagaggaggaagaacaggaagaagagaaggaggacacg
gcccaggcgcagaagaggagaaaggtggagccgaaggggggtggtggcgcgttgcccgcc
gtcgacgcctggcgttcccgtccttcggcaccggcgtcttccaatacgacctggagcgcg
ccgcacaagcacgtggctgcgttcttggaggagcacgacgacccgcgcatccggctctac
gctgtcgacatcactgagtcggcgacgctcgcggcgatccgcaagtgctggaagggccgg
gatgcgcgctttcagattcgcgtggccaacatcaccaagatgaagaccgagggcatcccg
tgccgcgtcatcgccaacgccgccaacgaatggtatggccgcggcgccccgtcccgacag
ctgtcgttctcggccatgggcagcggtgtcaacctggcgatcaacaaggcggccggcccc
gcgctcgacaaggagaccaaagctcgctacaagggagtgcaccacgttgtgcatgtgatg
gcgcccaacatgaacccgcagcgcaacaactgcctgcacgatgactacaccaagggcgat
cgcttgctgggccagtgctactcctcgctgctcaccaccttctgggacctggtctcaggc
tcgcccaccaccaaggcgtccgcccaggccgaggacgaaatcgaagaagactttgacgaa
gccaactttgcgcctcgacccactgagacgaagaagtcagcgccagcggtgcctaagagc
agcgccaacgcgttcagcatgctcatgacggccaagaagcccgaggctgagcccaagggc
ggaaaggcggcctcggagggtgcctccgcgcccaaggccccggccagagcgggcggctgg
agcgatgcgctgaccccgtatgcgactcaccccgagaaagtgccgccaaatatcatgcac
caatacgacgacaagaccgtgtgtatctttgacaagttccccaaggtagcgttcaagcat
ctgttggtcctgccgcgtcggctgattccgggctacggcaacctgacggccgacgacgtg
cccctcctgaaggagatgcagaagcggggccagatgaccgttgagcagttgacgtcgcgc
tatggcacgctcaagttccgcctggggttccacgctgtgccgtcaatgcgacaacttcac
gactttgattccgagcacctgaagacgaagaagcactggaactcgttcacgaccgagttc
ttcataccggcggacaagttcatcaagacgctcgaaaccgacggcagcatccacttcgag
aaggccaggtacgaggcgtggctggaggcgccgctcaagtgccacgtatgccaccagagc
cagaagaccatgcccgccctcaagggccacctcctttcccacgcttga
DBGET
integrated database retrieval system
