Acanthamoeba castellanii: ACA1_271540
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Entry
ACA1_271540 CDS
T02667
Name
(RefSeq) leucine rich repeat domain containing protein
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
acan
Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acan04131
]
ACA1_271540
Membrane trafficking [BR:
acan04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
ACA1_271540
Protein recycling
Other Rab GTPase associated proteins
ACA1_271540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
VPS9
LRR_4
LRR_14
DUF5601
LRR_LRWD1
LRR_9
CUE
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
14915214
NCBI-ProteinID:
XP_004336622
UniProt:
L8GNS6
LinkDB
All DBs
Position
Unknown
AA seq
1249 aa
AA seq
DB search
MEAWDSGLDDDNDDNDQRQLQQQHGGEGALIAGLSGSPALHHQHEVKEEAGQQQLEEEDP
LLQPPHHEEPEKEKEKEEEEEEDNNNEDKDEEEEEEKEEALQLLQVGTAPVAAAAARGGR
GVDAPPPSPPPVAVVGGTAPAAAAEEGIASDEGGATGDAAAPVPATSGGGSSTTSFIDSV
GPTKLAHVLAQARAQRATLLSLTGCLVAEQGGVVPSQLCELSSLTRLHLAKNHLTALPPL
FGLLSNLVELDVSENRLAELPSSFSRLSSLEVLNLGMNELAGLPPEVGDLSSLRVLNLSF
NRLAALPTWPLGASLTALVDLDLSANALTALPPALPPTLTSLHLTDNRLTALPDDFGLHV
PVLRRLALARNALSALPASFPRLTRLRQLDLRDNRLASLPHDAHLLAKLKVLFLEGNPLR
IPVPHLPEGTHRSFATNPSAIHAYLSLYQYGEGAAGEDEHTQRMNRENARQSLERMFTNI
DPEVISSVLEACEGSANSAIEFLLSISETPAISAAAGSGISPAETGAASSPSAPGPAFSF
SSLLQAIEEKIDEKIIGDDASRKARDRSSSMFTKVLNTIKDKINENQQLDPARDSDDLPT
PVPITPELMAHRAARARVPGGRLSQSSTNNFLVYEKENNRMLRALCSRPEFRDLLNLTLL
VPQDIVLDGVAITRDLLQTHIVQWEGTYEQSPLFSSLNDIMGSLSPDMQSIILSLSGEGS
RKTADILREGQMEFEDIDYDVPLLLISSPLGHVDVLAAAAAPTSPSSPDHAHPEATSPSS
PFPSGEAAGSRDSEVMAGRVYSSTAQFDLRLAAPLSLDAFLTKLHDKNTRQLRITIESFA
RSIQKRKLGTDDKEQILSFLSRTRQAILSHPLWRGISAKEADYTAQALEAVVYTKIYKSI
FLSASDQERDRMLTEKMKKLAFVTPDMLGIPPRFCKKRMWAAAERELLMMNSVCSPTEKL
RALLNACRLIIELLKSLDNTAGADDFLPHLCMVVLRAYPPHLHSNVRFIARYTAPEILAG
ETLYYYTQLVSVISFVENIDGSHLNMQPQDYARLYDGGGDRSTHPSQLPRPHHDASQAAA
TGSLALLRPQRVGASVHSREHTRFLTASLEDLRYSDVPQLLAAYKALAAAAAAAPSPPPG
TATEQAADVAENAGSSEGESLVVVKVRCAGAEENGKLFRMVSFSPRAGIEGLRAAIAGRL
AQKPEGDDQAGLAQPVVGKIVLLPDVALECSADVLLLQPGDCLEVTLSI
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggaggcctgggacagtgggctggacgacgacaacgacgataacgaccagcggcagctg
cagcagcagcacggcggcgagggtgccctcattgcaggcctcagcgggtctcctgccctt
caccatcagcatgaggtgaaggaggaggctggccagcagcagctcgaagaagaggacccg
ctgctgcagcccccgcaccacgaggaaccggaaaaggaaaaggaaaaggaagaggaggag
gaggaggacaacaacaatgaagacaaagatgaggaagaggaagaggaaaaggaagaggcc
ctgcagctgctgcaggtgggtacggcaccagtagcagcagcagcagcacgaggtggccgg
ggcgtagacgcaccaccgccgtcaccgccgcccgtggcggtcgtgggaggcactgcaccg
gccgcggcagcagaggagggcatcgcgtcggacgagggcggagccacgggggacgctgcc
gctcccgtccccgccaccagcggcggcggcagcagcacgacgtcgttcatcgatagcgtg
ggtcccaccaaactggcccacgtgctggcccaggcgcgcgcacagagggccaccctcctc
tccctcaccgggtgcctggtggccgagcagggtggcgtggtgcccagccagctgtgtgag
ctgtcgtcgctgacccgactgcacctggccaagaaccacctcaccgccctcccgcccctg
ttcggcctcctctccaacctcgtcgagctggacgtgtcggagaaccggctggccgagttg
ccgtcgtcgttctcgcggctgtcgtcgctcgaggtgctcaacctgggcatgaacgagctc
gcggggctgccgccggaggtgggcgacctgagcagcctgcgggtgctcaacctctccttc
aaccgcctcgcggcgctccccacgtggccgctgggggcctcgctcacggccctggtggac
ctcgacctctcggccaacgccctcacggccctacccccggccctcccgcccaccctcacc
tcgctccacctcaccgacaaccggctcaccgccctccccgacgactttggcctccacgtg
cccgtcctccgtcgtctcgctctcgcccgcaacgccctctccgccctccccgcctccttc
ccgcgcctcacccgcctccggcagctcgacctccgcgacaaccgcctcgcgtccctcccc
cacgacgcacacctgcttgccaagctcaaggtgctgttcctggagggcaatcccctgcgc
atcccggtgccccatctgccggagggcacgcaccgctccttcgccaccaacccgtcggcc
atccacgcctacctctccctctaccaatacggggagggagctgctggggaagacgaacac
acccagcgcatgaaccgggaaaacgcgcggcagagcctcgaacgcatgttcacgaatatc
gatcccgaggtcattagcagcgtgctggaggcctgtgagggaagtgccaattcggccatc
gagtttcttctctccatcagcgagaccccggcgatcagcgccgctgcggggagcggcatc
tctccagcggaaaccggcgccgcctcgtccccctctgcaccggggccggccttctcgttc
agttccctcctgcaggccatcgaagaaaaaatcgacgagaagatcatcggcgacgacgcg
agcaggaaggcccgcgacagaagcagcagtatgttcaccaaagtgctcaacaccatcaag
gacaagatcaacgagaaccagcagctcgacccggccagggattccgacgacctgcccacc
cccgttcccatcaccccagagctcatggcgcaccgggcagcccgtgcgcgggtgcccggg
ggacgtctgtcgcagtcgtccaccaacaatttcctcgtctacgagaaagagaacaaccgg
atgctgcgcgcgctttgctcgcgacccgagttccgggatctgctgaacctaaccctgctg
gtgccgcaagacatcgtgctcgatggcgtcgccatcacgcgggatctcctgcagacgcac
atcgtgcagtgggaaggcacgtatgagcaatcgcccctcttctcgtccctgaacgacatc
atgggctccctctcgcccgacatgcagtccatcatcctctcgctctccggagaagggagc
cgcaagacggctgacattctgcgcgagggccagatggagtttgaggacatcgactacgac
gtgcccctgctcctcatatcctccccgctgggccatgtcgacgtcctcgccgctgccgcc
gcgcccacgtcgccgtcctcgcccgaccacgcccatccggaggctacttcgccatcatct
ccctttcctagtggcgaggcagccggatcacgcgacagcgaagtcatggcgggtcgcgtg
tactcgagcacagcgcagtttgatctccgcctggcagcgccgctgtccctcgacgccttc
ctcaccaagctgcacgacaagaacacccgccagctgcgcatcaccatcgagagtttcgct
cgctctatccagaagaggaagctgggcaccgacgacaaggagcagatcctctcctttctc
agccggacgcggcaagcgatccttagccaccccctgtggcgaggcatctcggccaaggag
gccgactacacggcccaggcacttgaggcggtcgtgtacaccaaaatttacaagagcata
ttcctgtcggcgtcggatcaggagagggaccgcatgctgacggagaagatgaagaagctg
gcctttgtcaccccggacatgctcggcattcctccccgattttgcaaaaagcgcatgtgg
gccgccgccgagagagaactgctgatgatgaactccgtgtgctctccgaccgagaagctc
cgggctctcctcaatgcctgccgactcatcatcgagctgctcaaatcgctggataacacg
gcgggtgccgacgacttcctgccccacctgtgcatggtggtgctccgtgcctatccgccc
catctgcactccaacgtcaggttcattgcgcggtacacggcgccggagattctcgcgggg
gagacgctctactactacacccagctggtgtccgtcatttccttcgtggagaacatcgat
ggctcccacctcaacatgcaaccgcaggactatgctcgactctacgacgggggcggagac
cgcagcacccatccatcacaactccctcgcccgcaccatgacgccagccaggctgccgcc
acgggctccctcgcgctcctccgtcctcagcgcgtgggcgcgagtgtgcactcccgggag
cacactcgctttttgacagcgtccctcgaggacttgcggtacagcgacgtcccgcagttg
ctggccgcatacaaggccctcgctgctgctgctgctgctgcgccttccccgccgccgggg
actgcgactgagcaagctgccgacgtggccgagaacgccgggtcgtcagagggcgagtcc
ctcgtggtggtgaaagtgaggtgcgctggcgccgaggagaacggcaagctctttcgcatg
gtgtctttctctccgcgtgccggcatagaaggcctgcgcgctgccatcgcggggcgattg
gcacagaagccagaaggggacgatcaagccggcctggcgcaaccagttgtgggtaaaatc
gtgctcctgcccgatgttgccctggagtgcagtgctgatgtgctgctcctccaacctggc
gactgcttggaagtcaccttgtccatataa
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