Acanthamoeba castellanii: ACA1_275790
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Entry
ACA1_275790 CDS
T02667
Name
(RefSeq) RNA recognition motif domain containing protein
KO
K13167
SR-related and CTD-associated factor 4
Organism
acan
Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acan03021
]
ACA1_275790
03041 Spliceosome [BR:
acan03041
]
ACA1_275790
Transcription machinery [BR:
acan03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
ACA1_275790
Spliceosome [BR:
acan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
ACA1_275790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Nup35_RRM_2
RRM_PARP14_3
CTK3
Motif
Other DBs
NCBI-GeneID:
14916078
NCBI-ProteinID:
XP_004337418
UniProt:
L8GQX9
LinkDB
All DBs
Position
Unknown
AA seq
792 aa
AA seq
DB search
MEQFTDELRSVQNHKPPLSANKQHYKNVVNEVEKFIKKAKPEHRLTALYIIDAIVRGSIR
QFGSKDVYVGRFTANLERSLDYILQCSEKDQKAARRVIALWHKNKVFPPSVIDALVMVSI
RRTGVPPDLPEVDNLPSDTPPPMESEAKSPSPPSLSPSPSVERPSSQPNVLQQIQENAFG
FSAPSSSASASSQSFTPTLAPVSAPTDPRLAAQVQPQALRPPVDPRLGAAFSPSPAAATA
TSPPELSTALGNGHLLSMLGAQMAGLLPAAAQSTATGAFLGSTPTSFMPSSVALVHPPLL
RPRSYPPRCSPNARQQAPGKVPKNRGTAGHNPLYFDYGDDDDDDTRLEEQRKLRQEHEER
LAQEAATSQRLQPQAPPSSLPQPQPQPQQQWAAGPPLRNANVAPPSHMGQPQPPPQQQQT
PEQLAAALASFYGSDVAAPGGPPAYAAAHSHRPAAAATESAAYDPFTPSSFSSPPARPDP
VASGFTKVPTTTCYLGGLPPGTTHEVLRAHFAAYGRIMRLKVMEDKNVAFVTFAHRPDAE
RVKAQGDAGQVMVGGNLVKAYIPPPNPSNKSVHWRRGQCSFPAKVGWARGANPIGAKENF
NMETGETLVTVEEAMRHQQQDGQHAGGPPQFSGGRGRGGGGPYPAPGSLASAAPHWGGGG
PPAGSYQQADSGGYPLPQQAMMGHQQPGPFPPFAAAGGAGDFGQGGFRPGPGGSSWNEGA
PPPKRRRFDGSDDDGSGGRGGEYGGPPPRKPWRDDQRGHHHDDHRGVERRDDHHRHDRGG
RRRESGWDKVSS
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atggagcaattcacggacgagctgcgctccgtccagaatcacaagcccccgctcagcgcc
aacaagcaacactacaagaacgtggtcaatgaagtagagaaattcatcaagaaagccaag
cccgaacatcgcctgacggccctgtatatcatagatgccatcgtcaggggctccataagg
cagttcgggtcgaaggacgtgtacgtcggccgctttacagccaacctcgagcgttccctg
gactacatccttcagtgctctgagaaggaccagaaggcggcacgtcgggtcatcgcgctg
tggcacaagaacaaggtgttccctccgagcgtgatcgatgcgttggtcatggtgtccata
cgcagaactggcgtgcccccggatctgccggaggtggacaatctcccctcggacactcca
ccaccgatggagagcgaggccaagtctccctcgccgccctctctgagcccctcgccatcc
gtggagcgcccaagttcgcagcccaacgtgctgcaacagatccaggagaatgccttcggc
ttttccgcgccatcctcttccgcctccgcctcttcccagtccttcacgcccacgcttgct
cccgtgtcggcaccgaccgaccctcgactcgctgcccaagtccagccccaggcgttgcga
ccacctgtcgacccacgcttgggcgctgctttttctccttctcccgccgctgcgacggct
acctcgccgcccgagctctccactgccctgggcaacggccacctcctcagcatgctcgga
gcccagatggccggcctcttgcctgccgccgcacagtcgaccgccaccggggccttcttg
ggctccactcccacctcatttatgccctccagtgtggcgttggtccatccgccactgctg
cggccacgcagctacccgcctcgctgctcgcccaacgcgcgccagcaggcgcctggcaag
gtgccgaagaaccgaggcacggctggccacaatccactctactttgactatggcgacgat
gacgatgacgacacacgcctcgaagaacagcgaaaacttcgccaggagcacgaggaacga
ctcgcccaagaggcggcgacgtcgcagcgactgcaaccgcaggcgccgccatcttcacta
ccgcagccgcagccgcagccgcagcagcagtgggcggcagggccaccactacggaatgca
aatgtggctcctccatcgcacatgggccaaccacaaccaccaccacaacaacaacaaacc
ccggagcagttggccgctgccctcgcctccttctatggcagcgatgttgcagcgcctggc
gggccgccagcctacgccgccgcccattctcaccggccggcagcggcagcgacagagagt
gcggcctacgatccattcaccccctcttccttctccagtccgcctgcccgccctgacccc
gtcgcctccggtttcaccaaggttcccacgacgacgtgctacctggggggcctcccgccg
ggcaccacgcacgaggtgctgcgggcgcatttcgccgcctacggcaggatcatgcggctg
aaggtgatggaggacaagaatgtcgcttttgtcaccttcgcccatcgtcccgacgccgaa
cgcgtcaaggcgcagggcgacgccggacaggtcatggtcggcggcaatctcgtcaaggca
tacattccccccccaaacccctccaacaaatcggtccattggcgaagaggccaatgctcg
ttccctgccaaggtcgggtgggctcgcggcgccaatccgatcggagcaaaggagaacttc
aacatggagactggcgagaccttggtcacggtggaggaagccatgcgccaccagcagcaa
gatggccagcacgctggcggacctcctcagttcagtggtggacgtgggcgtggaggcggc
ggtccgtaccccgcgcccggctcactagcctcggcggctccgcattggggcggtggcggc
ccgcccgcgggtagctaccaacaagcggactccggcgggtacccgcttccccagcaggcc
atgatggggcaccagcagccgggtccattcccgccttttgccgccgccggcggcgcgggg
gatttcggccaaggcggcttccggccgggtcctgggggatcctcgtggaacgagggggcg
ccaccaccgaaacggcgccgcttcgacggaagcgatgatgacggtagcggcggcagggga
ggcgaatacggagggcctccgccgcgcaagccttggcgggacgaccagcggggacaccac
cacgacgaccaccgaggcgtagagaggagggacgaccaccaccgtcacgaccgaggcggc
cgcaggcgggagtcgggctgggataaagtctcctcctga
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