Acanthamoeba castellanii: ACA1_291020
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Entry
ACA1_291020 CDS
T02667
Name
(RefSeq) exosome complex exonuclease rrp41, putative
KO
K11600
exosome complex component RRP41
Organism
acan
Acanthamoeba castellanii
Pathway
acan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACA1_291020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_291020
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ACA1_291020
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
ACA1_291020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
14926374
NCBI-ProteinID:
XP_004368079
UniProt:
L8HIA7
LinkDB
All DBs
Position
Unknown
AA seq
205 aa
AA seq
DB search
MSKFEFVSPEGLRMDGRRPGELRRIEAKMGVVSKADGSALFRQGNTQVLATIYGPKEAGF
ASGERKSKKTDKKTVELGMLIRQTFESVVMTALYPRSQIDIYVQVLQSDGGALSAAINAT
TLAMIDADPNFVENTAGGPELLVAIEPKSQLVVSMEMESKLPMEMYERVAKLAIDGCNLI
YRVLTDEVRDYTLQLYQARSGIGSA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagttcgagtttgtgtcgcccgaggggctgcgcatggatggccgacgaccgggc
gagctgcgtcggatagaggccaagatgggcgtggtgagcaaggcagatggctccgcgctc
ttccggcagggcaacacgcaagtcctggccaccatttacggaccaaaggaggctggcttt
gccagtggcgagcgcaagagcaagaagacagacaaaaaaactgtggagctgggcatgctc
attcgacagacgttcgaatcggtggtgatgaccgccctctaccctcgttcacagatcgat
atctatgtccaggtcctccagtcagacggcggcgcgctgagcgcggccatcaacgccacg
acgctggcgatgatagatgccgatcccaactttgtggagaacacggcaggcgggccagag
ctgctggtggcgatcgagcccaagagccagctggtggtgtcgatggagatggagagcaag
ctgcccatggagatgtacgagcgggtcgccaagctggccatcgacggctgcaaccttatc
taccgagtgctcaccgacgaggtgcgcgactacacgctccagctgtaccaggccagatcc
ggtatcggcagcgcttga
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integrated database retrieval system
