Acanthamoeba castellanii: ACA1_291540
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Entry
ACA1_291540 CDS
T02667
Name
(RefSeq) nucleoporin interacting component protein
KO
K14309
nuclear pore complex protein Nup93
Organism
acan
Acanthamoeba castellanii
Pathway
acan03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ACA1_291540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acan03019
]
ACA1_291540
Messenger RNA biogenesis [BR:
acan03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
ACA1_291540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
14926396
NCBI-ProteinID:
XP_004368101
UniProt:
L8HLP6
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MDGPSKRASSFSSLLEQSRQLARQTGEYLIQRNVDQIDDTTRSLHTTLSHSTKDVAKNKG
RYLLATKGFDADKLSRNLNAVNLKLTYEPLELALADTDLEGSLKYARLPLFWTLTLDHFK
RNSAKKLDSDWEGAKSELLEALGFSSALLPRGTSAPSTPMKPGMDFTAAALASPATPLGR
AGAARSAQEAVGKMTAYGKVVDELNQQRREKRSFSTMQAFQQAARTVDDTELRRKEVADC
WDLLSRIVGEPEQATSAAVALPEAVYERTYREAPEALSRKFLSGAKQYQRVMQLVVDRNA
KRAELGGEPGMHSLARAYARAVALSRPGAHSQLEEAGSAWAEIYYALRAGDVGSACQLAL
SANPPLQEFAGLLQAFSQNGHLSELQQADCRRTLNATRDPFKQIIYMLLTRHTPSSLPAP
ISTTQDWIWFHLSLIVQEENGEAFAASLRRLQQQVCKFGPDHFNAKKHPLLYFQVVLITL
QFEKAIEFLWGKGDYAVEAVHFATGLYYYGVLRVPDADAPRSPNSIYSETSGRSAVDLPR
MLWHYALAVVEQRRDLALALNYIHLVRDVALEDLMLKDFVLNTREVDALLGTEGREGLVL
RVLGDAARVRRLREVVAAACEERAELPAAVKLYHEAGDYEKVLSLLNAALGPLVSAAGPD
RQALIALALDVNTRYSTIREAPTRSLETLRTLIQTAHFFDLSNANRLPEALQRLEVIGIL
PFDQATVPEKVELFAKLDETVKRCVGDLILAAMSVLYKLYGAIAPGTGSQSASFLFPSDP
ARLHEMEAIKSRARALAAFTGRIQYRLPSDVTSRLLRFEVLMS
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggacgggcctagcaaaagagccagctccttctcctcgctgctggagcaatcccgccag
ttggcgcggcagacgggcgagtacctcattcagaggaatgtagatcagatcgacgacaca
acgcgctccctgcacacgaccctgtcccattcaacgaaagatgtcgccaagaacaagggt
cgctacctcttggcgaccaagggcttcgatgcagacaagctatccagaaatctgaacgct
gtcaatctcaaattaacctacgagccccttgagctcgcgctcgccgataccgatctcgaa
ggctcgctcaagtatgctcgtcttcccctcttttggaccctgacgcttgatcacttcaaa
aggaactcagccaagaagctggacagcgactgggagggagccaagtcggagctactcgag
gcgctgggcttctcctcggccctgctcccacgcgggacctctgcaccctctacgcccatg
aagcccggtatggacttcaccgccgcggctctcgcctcgcccgcgactccactcggccgg
gccggcgctgcgcgatcggcacaggaggccgtcggcaagatgaccgcctatggcaaggtc
gtggacgagctcaaccaacagaggcgagagaagcgctccttctccaccatgcaggccttc
cagcaggctgcccggaccgtcgatgacaccgagctgcggcggaaggaggtggcggactgc
tgggacctgctgagcaggattgtgggtgagcccgagcaggccacgagcgccgccgtggcc
ctacccgaggccgtctacgagcggacctaccgcgaggcgcccgaggccctctcgcgcaag
tttctctccggcgccaaacagtaccaacgagtgatgcagctggtggtagatcggaatgcc
aagcgggccgagctgggcggcgagcccggtatgcacagcctcgcgcgggcctacgcgcgg
gccgtggccctctcccgccccggcgcacacagccagctcgaggaggccggcagcgcgtgg
gccgagatctactacgccctccgcgccggagacgtcggctctgcctgccagctcgcactc
tcggccaacccgcctcttcaggaattcgccggcctgctccaggccttttcacaaaacgga
cacctgtcggagctgcaacaggccgattgcaggcgcacgctgaatgccacgcgcgatccc
ttcaagcaaataatctacatgctgctcacgcgccacacgccgagctctctgcccgctccc
atctccaccacacaggactggatttggttccacctctcgctcatcgtccaggaggagaac
ggcgaagcgttcgccgcgtccctccgcaggctgcagcagcaggtgtgcaagttcggaccg
gaccacttcaacgccaagaagcacccgctcctctacttccaggtggtgctcatcacgctc
cagttcgagaaggccatcgagttcctgtggggcaagggtgactacgccgtggaggcggtg
cactttgccacgggcctctactactacggcgtgctgcgcgtgcctgacgccgacgcgcct
cgctcgcccaactccatctacagtgagacctccggtagatctgctgtcgatcttccgcgc
atgctgtggcactacgccctggcagtcgtcgagcagagacgagatctcgcgctggcgctc
aactacattcatctcgtgagggacgtggcgctggaggacctgatgctgaaggactttgtg
ctcaacacgcgagaggtggacgccctcctcggaaccgagggccgggaggggctggtgctg
cgcgtgttgggcgatgccgcacgcgtgcgaaggctccgcgaggtggtcgccgccgcctgc
gaggagcgcgccgagctgccggccgccgtcaagctctaccacgaggcgggcgactacgag
aaggtgctgtcgctgctcaacgccgcgctgggtccgctggtatcggcggccggaccggac
aggcaggccctcatcgcgctcgcgctcgacgtcaacacgcgctattcgaccatccgcgag
gcgcccaccaggtcgctcgagaccctgcgcaccctcatccagaccgcccacttcttcgac
ctcagcaacgccaaccgactgcccgaagcgctgcagcggttggaggtgattggcattctg
ccgttcgaccaggcgacggtgccggagaaggtggagctgttcgcgaagctcgacgagacg
gtgaagcgatgcgtgggcgacctcatcctggccgccatgtcggtgctctacaagctctac
ggcgccatcgcgcccggcaccgggagccagtcggcctcgttcctcttcccgtccgacccg
gcgcggcttcacgagatggaggccatcaagagccgcgcacgcgccctggccgccttcacc
ggccgcatccagtaccgactgccgtccgacgtcacctcccgccttctccgcttcgaggtc
ctcatgagctag
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