KEGG   Acanthamoeba castellanii: ACA1_294870
Entry
ACA1_294870       CDS       T02667                                 
Name
(RefSeq) Hypothetical protein
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
acan  Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:acan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:acan03009]
    ACA1_294870
   04121 Ubiquitin system [BR:acan04121]
    ACA1_294870
Ribosome biogenesis [BR:acan03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    ACA1_294870
Ubiquitin system [BR:acan04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     ACA1_294870
SSDB
Motif
Pfam: Sof1 WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st WD40_RFWD3 WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214
Other DBs
NCBI-GeneID: 14926489
NCBI-ProteinID: XP_004368187
UniProt: L8HJP4
LinkDB
Position
Unknown
AA seq 456 aa
MKVKTISRNEAEFTRERKVDLVRMQRNVDPAQHPFEKPREYTRALNAVKMDKIFARPFVA
ALNGHSDSVFSLCRHPDSLTHIFSGSCDGVVVVMGVPELKVWNLATHACLATLPAHRGFV
RGVALGHGNSSVITVGDDKAIKLWPISLDGLRNGLPEDIQPLTTFLGEHAFSGISHKANQ
PIFATSGPVILLWDETRGSPTATFEWGCDSVNAVKFNPIDQDVLASLASDRSLAFHDVRA
STPIRKVIMTMRGNAVAWNPMEAFNLSVASEDHNVYTFDMRRLDTALNVHQDHVAAVLDI
DYSPTGEEFVTGSYDRTLRIFRRSEGRSREVYHTKRMQRIFCVRFTGDSRFVMSASDDTN
IRLWKANAADPLKVLVPREKKKMEYQEKLKARYRHLPEIRRIDRHRHLPKAVHGATRLKS
VMKKAEQRKEKNRAAHSSQDTRPVPERKRHIVEVQQ
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgaaggtgaaaacgatttcccgtaatgaggcggaattcacgagggagaggaaggtggat
ttggtccgcatgcagcgcaatgtggacccggcccagcaccccttcgagaagccgcgagag
tacacgcgtgccctcaatgccgtgaagatggacaagatctttgcccggcccttcgtggcc
gccctcaacggccacagcgacagcgttttctccctctgccgccaccccgactccctcacc
cacatcttctccggcagctgcgatggcgtcgtcgtcgtcatgggtgtaccagagctcaag
gtgtggaatttggcgacgcacgcgtgcctggccacgctgccggcccatcgcgggttcgtg
cgcggtgtggcgttgggccacggcaactcgtcggtcatcaccgtcggcgacgacaaggcc
atcaagctgtggccgatctccctcgacggcctccgtaacggcctccccgaggatatccag
cccctcaccaccttcctgggcgagcacgccttctcggggatcagccacaaggccaaccag
cccatcttcgccacctctggcccggtcattctcctgtgggacgagacccgcggctcgccc
accgccaccttcgagtggggctgcgacagcgtcaacgcggtcaaattcaatcccatcgac
caggacgtgctcgcctcgctggcctccgaccgctccctcgccttccacgacgttcgcgcc
tcgaccccgatccgcaaggtgatcatgacgatgcggggcaacgccgtggcgtggaacccc
atggaggccttcaacttgtcggtcgccagcgaagatcacaacgtgtatacattcgacatg
cgacgactcgatactgccctcaacgtgcaccaggaccacgtggcggccgtgctggacatc
gactactcgccgacgggcgaggagttcgtcacgggctcctacgatcgcacgctccgaatc
ttccgccgctccgagggacgtagcagggaggtctaccacacaaagcggatgcagaggatc
ttctgcgtgcggttcacgggcgactcgcggttcgtgatgtcggcgtcagacgacaccaac
attcgactgtggaaggccaacgcggccgacccgctcaaggtgctagtgccgcgcgagaag
aagaagatggagtaccaggagaagctcaaggcgcgataccgccacctgcccgagatccgc
cgcatcgaccgccatcgccacctgcccaaggcggtgcatggcgctactcgcctcaagagc
gtcatgaagaaggccgagcagcgcaaggagaagaaccgcgcggcccactccagccaggac
accaggcccgtgcccgaacgcaagcgccacatcgtcgaggtccagcagtga

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