Acanthamoeba castellanii: ACA1_298630
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Entry
ACA1_298630 CDS
T02667
Name
(RefSeq) vacuolar protein sorting 16, putative
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
acan
Acanthamoeba castellanii
Pathway
acan04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
ACA1_298630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
acan04131
]
ACA1_298630
Membrane trafficking [BR:
acan04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
ACA1_298630
Hops complex
ACA1_298630
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_C
Vps16_N
DUF6057
TPR_IF140-IFT172
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
14919423
NCBI-ProteinID:
XP_004340672
UniProt:
L8H081
LinkDB
All DBs
Position
Unknown
AA seq
861 aa
AA seq
DB search
MFNTKTSLALASATKEQEKAEEDALLSEPHPTTLWKPLGDRNYRKRELYDLNWEVDLSKH
VVTGAPCGGALAVARDERKIVLLANTESLKSQTHIYTSSGVLIKSFAWDSQKGRVVRLGW
TADEKLVCIFESGAVMIYNVQGENVSAWSVGPECGEIQDALFWGTGFVVLSKALRLFAVM
NLADPKIRPLPDARLESAPVTWCVIGPDVSLSKGVEVLLATATGTVLLVTHEHVKDLLLQ
NGPFVRMTVSRNGKLIACFTEAGTLWVVSADFSKSLSEFGTGSKVPPSQVEWCGADSVVM
YWPTVGLLMVGPNGHWIKYSYAEPGLSLLPDPDGLRIFSATKCEFLQKVPAAVEDVFKIG
SEAPSALLYDALAHYKRGSPRAYENVKMIKAELVEAVDGCIEAAGHEFSPALQRRLLEAA
EFGKGFAEGFRAERLVEMCKALHVINNVRQSDIGMPLTFLQYDMLGPEALIERLVNRHLH
PLADAIAGFLKLKRDSILIHWASRKVRTEAPEREILEQVVSKLAGVPGVPYADIASAAYK
ARRPDLATRLLEYEPRASAQVPLLLHMGEDENALSKALDSGDTDLVYLVLLHIRRSRSGA
DFFKIIRSRKGAVDLLVAYCKQQDLDLLKDIYYQAGMPNQSAHVAVIEAYQHAELEKRVR
GLQIALNLYKDTGDLFASKATETEIRLLLVQKELESETGERDFVGGSLTDTLFRLIASRN
LKRAQKIKSDFKARWLLRVKVPDKRFWWVAVRALSTARDWATLEQFAKSKKSPIGFRPFA
EVCIEQGAMDEAAKYIAMLSDSAERVQMFLLVNAIREAAQVAFEQKDVQLLQSILPKATT
RQDQALVMEMLAKLGVSVERL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacactaagacgtcgctggccttggcctcggcgacgaaggagcaggagaaggcg
gaagaggatgccctgctctcagagcctcatcctaccaccctctggaagcccctcggcgat
cgcaactaccgaaagagggagctgtacgatttgaattgggaagtggacctctccaagcac
gtcgtcaccggcgcgccttgcggcggagccctcgcggtggcgagggacgaaaggaagatc
gtgctgctcgccaacaccgaatcgctcaagtcgcagacccacatctacacctcctccggc
gtgctcatcaaatccttcgcttgggacagccaaaagggtcgcgtggtgcgtttgggctgg
acagccgatgagaagctcgtctgcatcttcgagtcgggtgcagtgatgatctacaatgta
cagggcgagaacgtctccgcctggagcgtggggccggaatgcggtgagatccaggacgcg
ttgttctggggcacgggtttcgtggttctctcgaaagcgttgcgcctgttcgccgtcatg
aacctcgccgaccccaagatccgacctctccccgatgcccgcctggagagtgcgccggtg
acgtggtgcgttatcggacccgacgtgtcgctgtcgaagggcgtcgaggtgctgctggcc
accgccaccggaaccgtactcctggtcacccacgagcacgtcaaggatctgctgttgcaa
aacggaccgttcgtgcgcatgaccgtctcgcgcaacggcaaactgatcgcctgcttcacc
gaagccggtacgctgtgggtcgtgtcggccgacttctcgaagagcctgtccgagttcggc
accggctccaaggtgccgcccagccaggtcgagtggtgcggagccgactcagtggtgatg
tattggccgacggtgggtctgctgatggtgggacccaacggccattggatcaagtactcg
tatgcggagccgggcctttcgctgctgcccgaccccgacggcctccgtatcttctccgcc
actaaatgcgagtttctccagaaagtgcccgcggcggtggaagacgtgttcaagatcgga
tcggaagcgccgtccgcgctgctctacgacgccctcgcgcactacaaacgcggctcgcct
cgcgcctacgaaaacgtcaagatgatcaaagcggagctggtggaggccgtcgacggctgc
attgaagccgccgggcacgaattctctccggcgctccagcgacggcttctcgaagccgcc
gagttcggcaaggggttcgcggagggcttccgcgcggagcggttggtggagatgtgcaag
gccctccacgtcatcaacaacgtccgacagtccgacatcggcatgcccctcacattcctc
cagtacgacatgctgggtccggaggcgctgatcgagcggctcgtgaatcggcacctgcat
ccgctggccgacgccatcgcgggcttcctcaagctcaagcgcgatagtatcctcatccac
tgggccagccgcaaggtgcgcacggaagcgccagagcgggagatcctggagcaggtggtg
tccaagctcgccggggtgccgggcgtgccctacgccgacatcgcctccgccgcctacaag
gcccgccgtcccgacctcgccactcgcttgctcgagtacgagccgcgcgcgtcggcgcag
gtgccgctcctgctgcacatgggcgaggacgaaaacgccctctccaaagccctcgactct
ggcgacaccgacctggtgtacctggtgctgctgcacatcaggcgctcgcgcagcggagcc
gacttcttcaagatcatccgctcgcgcaagggcgccgtcgacctgctcgtcgcctactgc
aagcagcaggacctggacctgctgaaggacatctactaccaggccggcatgcccaaccag
tcggcccacgtcgccgtgatcgaggcctaccagcacgccgagttggagaagcgagtgcgt
gggctgcagattgccctcaacctgtacaaggacaccggtgacctgttcgcgtccaaggcg
acggagacggagatccggctgctgctggtgcagaaggagctggagtcggagacgggcgag
cgcgacttcgtgggcgggtccctcaccgacaccctcttccgcctcatcgcctcccgcaac
ctcaagcgcgcccagaagatcaagtccgacttcaaggcacgttggttgttaagagttaag
gtgccggacaagcgcttctggtgggtggcggtgcgagcgctgtcgacggcgcgggactgg
gccaccctcgagcagttcgccaagtccaagaagtcgcccatcggcttccggccatttgcg
gaggtgtgtatcgagcagggcgcgatggacgaggcggccaagtacatcgccatgctctcc
gactcagccgagcgagtgcagatgttcctcctggtgaacgcaattcgcgaggcggcccaa
gtggcattcgagcagaaggacgtgcagctgctgcagagcattctccccaaggccaccacc
cgacaagatcaggcgctggtgatggagatgttggccaagctgggcgtctctgttgaaagg
ctctga
DBGET
integrated database retrieval system
