Acanthamoeba castellanii: ACA1_313900
Help
Entry
ACA1_313900 CDS
T02667
Name
(RefSeq) premRNA splicing factor, putative
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
acan
Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acan03041
]
ACA1_313900
Enzymes [BR:
acan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACA1_313900
Spliceosome [BR:
acan03041
]
Complex C
Other components
Complex C specific factors
ACA1_313900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_19
AAA_22
AAA_30
nSTAND3
T2SSE
SRP54
AAA_7
ABC_tran
TrwB_AAD_bind
AAA_16
ResIII
Motif
Other DBs
NCBI-GeneID:
14919414
NCBI-ProteinID:
XP_004340671
UniProt:
L8GZI0
LinkDB
All DBs
Position
Unknown
AA seq
714 aa
AA seq
DB search
MERPDSEKASPGFWKPGAVAPEGLCGIGTGQFDRETEKEDLFVVFNANEKLSLSQQRQRL
PIFKNRTHILYLVEKYQTVVIVGSTGSGKTTQIPQYLHEAGWTQGGRVVACTQPRRVAAT
TVAERVAQEMGSLLGEEVGYAIRFDNKTEAEKTKIKFMTDGLLLRETMLDPLLSKYSVII
ASPRLDEAHERSIHTDILMGLLKKIQRKRPELRLIVSSATLEAQKLADFFNTNKTTDPAN
DTAAILSIEGRQFPVDIFYLKQPTDNYVHAAIDTVINIHKTEPPGDVLVFLTGSEEVDDT
VELIRQRAAEIRPGDLKPGSPRSLSVLPIYSGLPGAQQMKVFQTMPKHVRKVIVATNIAE
TSITIDGVVYVVDSGFVKIKAYNPATAMEALVVVPVAQAGADQRAGRSGRQRPGKCYRLY
TEAAYRAMRVNTIPEMQRTDLAPVLLQLKALGIDNVLRFEFPTPPPSQCMMRALELLYAL
GALDEYGKLTQPIGYTLAELPVGPTLGKMLLKSGELGCSEEVLSIAAMLSVQMVFVYPRD
FRNTVDAVRKRFAVFEGDTLTWLNVFNEFMRNNQTQKWCKEHYVNHRVMLRAVEIRNQLR
AYLRRYKVPLVSALGNPDIPDATVPIRKAVVSGFFANAAFLQPDGSYKTAKSHQTLHIHP
SSMLFNTTPAWVVYSEVVSTTKNFMRDVTVIEPTWLAELASHFYDWKGKPMPKT
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaccagacagcgagaaggcgtcgcccggcttctggaagccgggcgcggtggcg
ccggagggactatgtggcattggcactggccagttcgacagggagacggagaaagaggat
ctctttgtggtgttcaatgcgaacgaaaagctcagcctgagccagcagcgacaaaggctc
cccatcttcaagaaccgcacgcacattctgtacctggtggagaagtatcagactgtagtc
atcgttggctcgacgggatcgggcaagaccactcagattccccaatacctgcacgaagcc
ggctggactcagggagggagagtggtggcctgtacccagcctaggcgagtggcagcgaca
acagtggcggagagagtagcacaggagatgggatcgctgcttggggaagaggtcggttac
gccattcgctttgacaacaaaacggaagccgaaaagaccaagatcaagttcatgaccgac
ggtttgctgctgcgagagaccatgctcgatccgctgctctccaagtattcggtcatcatc
gcttctcctaggctcgatgaagcacacgaacgcagcattcataccgatatcctcatgggg
ctcctcaagaagatccaacggaagcggccagagctgcgactaattgtgtcttctgccacg
ctcgaggcgcagaagttggccgatttcttcaacaccaacaaaactaccgatcccgccaac
gacactgcggccatcctgtcgattgaagggcgacagtttcccgtggacatcttctacctg
aagcagccaacggacaactacgtgcacgcagccattgacaccgtaatcaacatccacaaa
acagagcctccaggcgatgtcctggtctttttgactggctcggaagaggtcgatgacacc
gtcgagcttattcgacagcgggcagcggagattcgaccaggcgacctcaagccgggcagc
ccgcgcagtctctcggttttgcccatctattcgggcctgcctggtgcacagcagatgaag
gtgttccaaactatgcccaagcatgtgcgaaaggtaatcgtggcgaccaacatcgccgaa
acctcgatcacaatcgatggcgttgtctacgttgtcgactcaggcttcgtcaagatcaaa
gcgtacaacccggccacagcaatggaagcgttggtggtagtcccggtcgcccaggcggga
gccgatcagcgagcaggtcgctccggacggcaacgacccggcaaatgctaccgtctttac
accgaggcggcctatcgtgccatgcgagtcaacaccatccctgaaatgcagaggacggac
ctggccccggtgctcttgcagctcaaggcgctgggcattgataacgtgcttagattcgag
ttccccactccacctccttctcagtgcatgatgcgggcgctcgagctgctgtatgctctg
ggcgcattggatgaatacggaaagctcacccagcccatcggctacaccctcgccgagctg
cctgtcggacccacgctgggcaaaatgctgctcaaatccggcgagctgggctgctcggag
gaggtgctctccatcgctgccatgctctcagtccagatggtctttgtgtatccgcgagac
tttcgcaacactgtcgacgccgtgcggaagcgcttcgccgtgttcgagggtgacactctc
acttggctcaacgtgttcaacgagtttatgcgcaacaaccagacgcagaagtggtgtaag
gagcactacgtcaaccaccgggtcatgctgcgcgctgtggagatcagaaaccagctccgg
gcctacctgcgacgctacaaggtgccgctggtatcggcgctgggcaatccggacattccc
gatgccacggtgcccatacggaaggccgtggtgagtggtttcttcgccaatgcggccttc
ctgcagcccgatggctcctacaagacggccaagtcgcaccagactctgcacattcatccg
tcgtcgatgctcttcaacaccacaccggcctgggtggtgtactcggaggtcgtttccacc
accaagaacttcatgcgcgacgtgaccgtcatcgaacccacctggctcgccgagctcgcg
tcccacttctacgactggaagggcaagcccatgcccaagacgtga
DBGET
integrated database retrieval system
