Acanthamoeba castellanii: ACA1_326790
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Entry
ACA1_326790 CDS
T02667
Name
(RefSeq) helicase conserved Cterminal domain containing protein
KO
K13026
ATP-dependent RNA helicase DHX57 [EC:
5.6.2.6
]
Organism
acan
Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
acan03012
]
ACA1_326790
Enzymes [BR:
acan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACA1_326790
Translation factors [BR:
acan03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
ACA1_326790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DSRM_DHX29
Helicase_C
DEAD
RWD
HA2_C
HA2_N
AAA_19
AAA_22
DND1_DSRM
nSTAND3
AAA_14
MeaB
ATPase
UBA_DHX29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
14926787
NCBI-ProteinID:
XP_004358285
UniProt:
L8HMU6
LinkDB
All DBs
Position
Unknown
AA seq
1534 aa
AA seq
DB search
MNRKGADDGGRKKKSDKKKDPPPKKTRPMVQEHRGAGSPLRRWTSEREEQYRHPTHLHAA
QKAGTVESLDAPPKPPPLFGSWTGKTPVTMLNEWCQKNKWARPNFSPVKSCPEGFRWRVV
LINLTNKKTEEKYTHYTRDPLPVSDMARCLHRVLPPEMRDLWAQLDIDAKEKKEKDTERA
QKAEEVKEKKENLEKRLQKMPQIYMSPTARSLVENIISSLRSRQPPVTAQSRPVDSDLAA
DDGGFDPREAEEEIDLGWDGEEEEDVDRAAAKAEEAKAKRMAEKTLRRRLKQLGWRKEDV
DRVLAALPERDLPPTDDLNKRVKKVLDWLLLHVAEEHLPVEYQPAKTLEIGITAFPSAKQ
PKSGEERELELLQADTKNADKATDSFYTLFALIARRATKEEASDGCALKLESSSAADAVA
ALPKKGDEREAWEIEELRRDEMLALEAILGDDFTARSVAVAGLGGDALPVDVLQVRLPPD
SLSLEASAFQPFQLALADLRLEFHIPAHPHSLYPLQLPLVFPSVSLTPTTTAAAGRGGGA
GAPAQLVPRVVAKLKHRIIAELAAQAQEMLGEAMVYSLCQWLQSNIGQLVRAVVESEQRP
TVAVAAPTNQQPQKQPQPAKAANGRPDKAPTVTVGAAPQGQRGGAVAGRSAPRRPRGQPQ
VSEEQVRELSAQLTESLRAKQQRPDYIEMQRVRQRLPAASKREEIIRVIRNNQVIVLTGA
TGCGKSTQVPQYIMEDMIAQNEGGRCNIIVTQPRRISALGLAQRVSAEQCEDVGNTVGYQ
IRLESAKSKNTRLLFCTTGILLRRLTGSSGEDKELRGISHIIVDEVHERNLDSDFLLIVL
KELVRARKDIKVILMSATLDADLFAHYFASPGGRGAAAAVGAPVISIPGFTYPVGEHYLE
DALELLRGRGLADDIAAQQRRGGGFGGGVKRTKAEKEEDAKRREDILRSYAAYSVETREA
LATINENKLEPALLEHLIFFICEEGERTFPELSEEKGSGSKGAILVFFSGMADILTMLER
LQRGARDRRAEHKYLILPLHSSISTAQQQRVFERPPQGVRKIILSTNIAETSVTIDDVVV
VIDTGKMNEMQYDPVSKLSCLGETWIAKANAAQRRGRAGRVKKGLCFKLYTERRHADLMD
QRPPEILRVPLEQLCLQIKLLNVRATVKQFLHQALQPPEDHAIQSALNTLHQVNALEKEE
EKLTPLGYHLAQLPVDVHIGKMMLFGAILCCLDPVLTIAAAMSAGKSAFYSPPDRREEAN
QARFGLALDKSDHLTLMNAYNGWLAAKADGREMQYCNDAIADLKRQYAELLSEIGFLDQR
VSTRLMNKQAKLAGRGSDGVKEATGARLNINAKNTRVIKAALCCGLYPNVVRISSPETRY
VQVIPGSIAQPHNARDLKFYTRDDGRVFLHPSSVNFSVNEFDSPWLLFSEKVKTSKVFVR
QSSMVSHYPLLLFGREIDVVHHLKIIKVDDWIQFRADPRIAVLTKELKVELDKLLTAKIS
DPTFDISHSGLIEVITQLISTDGLIGPQEAAKWS
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagggagcggacgatggcggcaggaagaagaagtccgacaagaagaaggac
ccaccacccaagaaaacaaggccgatggtccaggagcaccgcggagcgggcagccccctc
cgtcgctggacaagcgaaagggaggagcagtaccgccaccccacccaccttcacgccgcc
cagaaggccggtacagtggagtccctggacgcaccgccaaagccgcctcctctgtttggc
agctggacgggcaagactccggtcaccatgctgaacgagtggtgtcagaagaacaaatgg
gccaggccgaacttctcgcccgtcaagtcgtgcccggagggcttccggtggcgtgtggtg
ctgatcaacctcaccaacaagaagaccgaggagaagtacacccactacacccgagacccg
ttgcccgtgtccgacatggccaggtgcctacaccgagtcttgccgcctgagatgcgcgat
ctgtgggcgcagctggacatcgatgccaaggaaaagaaggagaaggataccgagcgggca
caaaaggccgaagaggtgaaggagaagaaggagaacctggagaagcggctgcagaagatg
ccgcagatctacatgagcccgaccgcgcgcagcctcgtggagaacatcatcagctccctc
cgcagccgccagccccccgtcactgcgcagtcgcgccccgtcgactctgatctggccgcc
gacgacggcgggttcgacccccgcgaggccgaagaggagatcgacctcgggtgggacggc
gaagaggaggaggacgtcgaccgcgcggcggcgaaggcggaggaggccaaggccaagcgg
atggccgagaagaccctccgccgccggctaaagcagctcggctggcgcaaggaggacgtc
gaccgcgtcctggcggcgctgcccgagcgggacctgccgccgaccgacgacctcaacaag
cgggtcaagaaggtgctcgactggctgctgctccacgtggccgaagagcacctgcccgtc
gagtaccaaccggccaagaccctcgagatcggcattaccgcctttccctcagccaagcag
cctaagagcggagaggaacgggagctggagctgttgcaggcggataccaagaacgcggac
aaagccaccgacagcttctacacgctctttgcgctcatcgcgcgccgggcgacgaaggaa
gaggccagcgacggctgcgcgctcaagctggagtcctcctcggccgccgacgccgtggcc
gccctccccaagaagggcgacgagcgcgaggcctgggagatcgaggagctgcgacgcgac
gagatgctcgccctggaggccatcctcggcgatgactttaccgcgcgctcggtcgccgtc
gccgggctcggcggcgacgcgctgcccgtggacgtgctccaggtgcgcctgccgcccgac
tcgctgtcgctcgaggcctcggcattccagcccttccagctcgccctcgccgacctgcgc
ctcgaattccacattccggcccatccgcactcgctctacccgctccagctgcccctcgtc
ttcccctctgtttcgcttacgcccaccaccaccgccgccgcgggccgtggtggtggcgcc
ggtgcgccggcccagctggttccgcgggtggtggccaagctcaagcaccgcatcatagcc
gagctggcggcgcaggcccaggagatgctgggcgaggccatggtctactcgctctgccaa
tggctgcagagcaacatcggccagctcgtgcgcgccgtggtcgagtccgagcagcggccc
accgtcgcggtcgccgcaccgaccaatcaacagccgcagaagcagccgcagccagccaag
gccgccaatgggagacccgataaggccccgacggtgacggtcggcgccgcgccgcagggc
caacgcgggggcgctgtcgccggtcgttcggcgccgcggcgcccgcgcgggcagccgcag
gtgagcgaggagcaggtgcgggagctgagcgcgcagctgactgagagcctgcgggccaag
cagcagcggccggactacatcgagatgcagcgggtgcggcagcgactgccggccgcctcc
aagcgggaggagatcattcgcgtcatccgcaacaaccaggtcatcgtgctcaccggtgcc
acgggttgcggtaagtcgacgcaggtgccgcagtacattatggaggacatgatcgctcag
aacgagggcggccgatgcaacatcatcgtcacccagccccgccgaatctccgcactcggt
ctcgcccagcgagtgtcggcagagcagtgtgaagacgtgggcaacacagtgggttaccag
atccgcttggagtcggccaagtccaagaacacccggctgctgttctgcaccacgggtatc
ctcctgcggcgactcaccggctcatccggcgaggacaaggaactacgaggcatttcgcac
ataattgtggatgaggtgcacgagaggaacctggacagcgacttcctgctgatcgtgctc
aaggaactcgtgcgcgcgcggaaggacatcaaggtcatcctcatgagcgccacgctcgac
gccgacctcttcgcccactactttgcctcgcccggcggccgcggtgccgccgccgccgtc
ggcgcgcccgtgatctccatccccggcttcacttaccctgtgggcgagcactacctcgaa
gacgcgctcgagctcctgcgcggccgcgggctcgccgacgacatcgcggcccagcagcgg
cgaggcggcggcttcggcggcggggtgaagcggacaaaggccgagaaggaggaggacgcg
aagcggcgcgaggacatcctccggtcgtacgcggcttattcggtggagacgcgcgaggcg
ctggccacgatcaacgaaaacaagctcgaaccggccctgctcgagcacctcatcttcttc
atctgcgaggaaggcgagcgcaccttccccgaactctccgaggagaagggcagcggaagc
aagggcgccattctggtgttcttctcgggcatggcggacatcctgacgatgctcgagcgc
ctgcagaggggcgcgcgggaccgacgagccgagcacaagtacctcatcctgccgctccac
tcgtccatctccaccgcccagcagcagcgcgtgttcgagcggccgccccagggcgtgcgc
aagatcatcctctccaccaacatcgccgagacgtccgtcaccatcgatgacgtggtcgtg
gtgatcgacaccggcaagatgaacgaaatgcagtacgaccccgtatctaagctgtcgtgc
ctgggcgagacgtggatcgccaaggccaacgccgcacagcgacgcggtcgtgccggtcgt
gtgaagaagggcctctgcttcaagctctacacggagcggcgtcacgccgacctcatggac
caaaggccgccggagatcctgcgggtgccactggagcagctgtgcctgcagatcaagctc
ctcaacgtgcgggccaccgtgaagcagttcctgcaccaggccctccagcccccggaggac
cacgccatccagtccgccctcaacacgctgcatcaagtgaatgcgctcgagaaggaagag
gagaagctcactccgctgggctaccaccttgcgcaattgccggtggacgtgcatatcggg
aagatgatgctgttcggggccatcctctgctgcctcgatccggtgttgacgatcgcggcg
gccatgagcgcgggcaagtcggccttctactcgccgcccgaccgacgcgaggaggccaac
caggcgcgcttcgggctcgcgctggacaagagcgatcacctgaccctcatgaacgcctac
aacggatggctcgccgccaaggccgacggccgcgagatgcagtactgcaacgacgcgatc
gccgatctgaagcgccagtacgcggagctcctatcggaaatcggcttcctggaccagcgg
gtgagcacgcgactcatgaacaagcaggccaagctcgccggccgaggcagcgacggcgtg
aaggaggccacgggcgcgcgactcaatatcaacgccaagaacacgcgcgtcatcaaggcg
gccctttgctgcggcctctaccccaacgtcgtccgcatctcgtcgccggagacccgctac
gtccaagtcataccgggctccatcgcgcagccccacaacgccagggacctcaagttctat
accagagacgacggtcgtgtgttcctacacccgagctcggtgaacttctcggtgaacgag
ttcgattcgccgtggctgctgttcagcgagaaggtgaagacgagcaaggtgttcgtgcgt
caatcgagcatggtgtcccactacccgctcctgctcttcgggcgggagatcgacgtcgtg
caccacctcaagatcatcaaggtcgacgactggatccagttccgcgccgacccgcgaatc
gccgtcctgaccaaggagctgaaggtggaactggacaagcttctcactgcaaagatcagc
gatcccacgttcgacatcagccacagcgggctcatcgaggtcatcactcagctcatcagc
accgacggcctcattgggccgcaggaggccgcgaagtggagctag
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integrated database retrieval system
