Acanthamoeba castellanii: ACA1_338770
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Entry
ACA1_338770 CDS
T02667
Name
(RefSeq) ATPdependent RNA helicase dhx8, putative
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
acan
Acanthamoeba castellanii
Pathway
acan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACA1_338770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acan03041
]
ACA1_338770
03009 Ribosome biogenesis [BR:
acan03009
]
ACA1_338770
Enzymes [BR:
acan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACA1_338770
Spliceosome [BR:
acan03041
]
Complex A
U2 snRNP components
U2 related factors
ACA1_338770
Complex B
ACA1_338770
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
ACA1_338770
Ribosome biogenesis [BR:
acan03009
]
Eukaryotic type
90S particles
Helicases
ACA1_338770
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
AAA_22
AAA_30
DEAD
AAA_19
AAA_16
nSTAND3
PhoH
TsaE
SLFN-g3_helicase
Helicase_RecD
NB-ARC
AAA_24
DAP3
Myosin_head
ATPase_2
Motif
Other DBs
NCBI-GeneID:
14921244
NCBI-ProteinID:
XP_004342802
UniProt:
L8H568
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MEEIEKLQLLSLIPRPEPSECHIAQELQATKTSIIEQRKTLPIFKLREEMLQAMHDNQLL
VVFGEAGSGKTTQMTQYLAEAGYASRGMIGCTQPRRVAATSAAKRVAEEFGCRLGQEVGY
AIRFDDCTSPETKVKYMTDGMLLRECILDPSLSKYSVLILDEAHERTIPTDVLFGLLKKA
TQNCPDLKLIITSAMLEYAEKFSTYFNNCPIFTIPGRTFPVEILYTKSPETDYLDEALIT
VMQIHLSEPPGDVLLFLTGQEEIDTACQILSERMKSLGPMVPELVILPVYSALPSEMQTR
IFEPAARGSRKVVVATNIAQTSVTIDGIYYVVDPGFVKQKVYDPKMGMDSLVVSHLAGRR
EAAGRPCRANGPRQVLPAVHGVA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaatcgagaagctacagcttttgtcgctgattcccaggcccgagcccagcgag
tgccacatcgcgcaggagttgcaggccaccaagacctcgatcatcgagcagcgcaagacc
ctgccgatcttcaagctgcgcgaggagatgctccaggccatgcacgacaaccagcttctg
gtcgtatttggcgaggcgggatccggcaagacgacacagatgacgcagtacctggccgaa
gctggctacgcctcgcgtggcatgatcgggtgcacgcagcccaggcgtgtggctgccacg
tccgccgccaagcgtgtggccgaggaattcggttgccgcctgggtcaggaggttggctac
gccatccgtttcgacgactgcaccagccccgagaccaaggtgaagtacatgaccgacggt
atgctgctgcgcgagtgcattctcgaccccagcctgtcgaagtactcggtgctcatactc
gacgaggctcacgagcggaccatccccacggacgtcctcttcggcctgctgaagaaggcg
acgcagaactgccctgacctcaagctcatcatcacgtcggccatgctcgaatatgccgag
aagttctccacctacttcaacaactgcccgatcttcaccatacccggccgcacgttcccc
gtcgagatcctctacacgaagtcgcccgagaccgactacctcgacgaggccctcatcacc
gtcatgcagatccatctctccgagccgcccggcgacgtcttgctcttcctcacgggtcag
gaggagattgatacggcgtgccagatcctctctgagcgaatgaagtcgctcggcccgatg
gtgcccgagctggtcatcctgcccgtctactcggccctgccctccgagatgcagacgcga
atcttcgagccggcggccaggggctcgcgaaaggtcgtcgtcgccaccaacatcgcccag
acatcggtcaccatcgacggaatctactacgtcgtcgatcccggcttcgtcaagcagaag
gtctacgacccgaagatgggtatggactcgctcgtcgtgtcccatctcgcaggccgccgc
gaggcagcgggccggccgtgccgggcgaacgggccccggcaagtgctaccggctgtacac
ggagtggcttga
DBGET
integrated database retrieval system
