Acanthamoeba castellanii: ACA1_340910
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Entry
ACA1_340910 CDS
T02667
Name
(RefSeq) MutS domain V domain containing protein
KO
K08737
DNA mismatch repair protein MSH6
Organism
acan
Acanthamoeba castellanii
Pathway
acan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ACA1_340910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acan03400
]
ACA1_340910
DNA repair and recombination proteins [BR:
acan03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
ACA1_340910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-GeneID:
14916113
NCBI-ProteinID:
XP_004337484
UniProt:
L8GTM6
LinkDB
All DBs
Position
Unknown
AA seq
1150 aa
AA seq
DB search
MEEEEDSEGEEAVHEDDDYQPMEEEEAEDDNEEEDVDNRKRRAKRRNATGGVDDGDEDSD
DDDVKPVLVKHKKEERMELQEERTQVTGEGEAVTRDSVGALAFKRGGAQRTKEERAERLR
EVLGRPALALIPEAGDATEADVPAKAGGKGGKAGQVLFREKHRHWIGEANQKDAQGRSRD
DPAYDPSTLFIPRKDLEGMNTFQRQYWEIKKQHWDKIIFCRNGVFWELYEKDAEISHRLL
DIKLADPGAMGMLTAGVFENAFDPYAAKLIALGYKVVKVEQMQANTKSSEKKNRPKDQAR
TNFIQLQVTRILSPGTLVDDIYIDDERAIYLLAVKEKWEPSGDSELPSYGVCFVDTATGE
VNVGQFQDDRDRTQFETLLLQIKPREILYEKEGPTALCSPQTLQLIKRNVNQPTLTRRRP
GDQFWNASTTADFLAGADYFAGGDREWPPVLSQLLKDHREAREGSELCLSAFGGVVSYLK
ELYLDKEVLAQGRIKTYAGTTFDSPNLVLDSKTIKNLEIFENTVDGKTEGTLLKLMDHCS
TPFGKRLFKRWLAMPLKRIHEIEERQNAVEDFNGSEDHSTTLKDAVALNLKGLPDLERIV
SRIHAGSSPILTFLSALDAFDLLWNMVSELQPLIGQLRSKRLAFLLTVGKGFPDIAPQLE
YFSRAFDRDQAKSEQRLILRPGVDEEFDAAREKVETIEQQLQQHLEDLKEEVGISDMAYA
TVRNKEYLIEIPRTPKNEAAIKRHKSTFIPINDTKSVGRYWTPTISALFADLEKARTDLE
RCRLGLFARNQQKFSENHREWSLAVACMAEVDCLHSLAITSSSLGEPVCRPTFVEAKEAF
FEAEEMRHPCISPKIGDEFIPNTLRVGHPHQPLILLTGPNMGGKSTLLRETCVLAIIAQV
GCFVPAASCRLSPVDRIFTRIGANDNIMAGQSTFMIELQETASILQHATPASLVILDELG
RGTATFDGYSIAYAVLEHLSRKVGCRTLFSTHYHMLTDEVVRNPHIALKHMSCHIDDDRK
EVTFLYKVADGVCPKSYGMNVARMAGVNEEIVASAEKIAQKFEGELAIDLQLMETENSAT
ADDDDSSDATTHGAAVGDDEVEAKSEAVGADEKARVEEIAHLLREEEEKGVAGRMAAFAR
LVGLWTQATQ
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaggaggacagcgagggcgaggaggcggttcatgaagacgacgactaccag
cccatggaagaagaggaagcggaagacgacaacgaagaagaagatgtcgacaacagaaag
cgacgagcgaagaggaggaacgccacgggtggggtcgacgacggcgacgaagacagcgac
gacgacgacgtgaagccggtgctcgtcaagcacaagaaagaagagcgcatggagctccaa
gaagagaggacacaggttacgggcgagggcgaggccgtaacgcgggacagcgtcggcgcg
ttggcattcaagcgcggtggcgcgcagcgcacgaaggaggagcgcgccgaacgactgagg
gaggtcctcggccgtccggcgctcgcgctcattcccgaggccggcgatgccaccgaggcc
gatgtaccggcgaaggccggcggcaagggcggcaaggccgggcaggttctgttccgcgag
aagcaccggcactggatcggggaggccaaccagaaggacgcccaggggcgctcgcgcgac
gaccctgcctacgatccctcgacgctcttcatcccgcgcaaggatctggaggggatgaac
acctttcagagacagtactgggagatcaagaagcagcactgggacaagatcatcttctgc
aggaacggcgtgttctgggagctgtacgagaaggacgccgagatcagtcatcgcctgctg
gacatcaagctggccgacccgggcgcgatggggatgctcaccgccggcgtgtttgagaac
gcgttcgacccctacgccgccaaactcatcgcgctcggctacaaggtggtcaaggtcgag
caaatgcaggccaacaccaagagctccgagaagaagaaccggcccaaggaccaggcacgc
accaacttcattcaactgcaggttacgcgcattctgagccccggcactctggtggacgac
atctacatcgacgacgaacgggccatctatctgttggccgtcaaggagaagtgggagccc
tccggtgactcggagctcccctcgtacggcgtgtgctttgtcgacaccgccacgggggag
gtgaacgtgggacagttccaggacgatcgcgaccgcacccagttcgagaccctgctgctg
cagatcaagccgcgtgagatcctctacgagaaggagggcccgaccgccctgtgctctcct
cagaccctgcagctcatcaaacggaacgtgaatcagcccacgctcacgaggcgcaggcca
ggggaccagttctggaacgcaagcacgaccgccgactttctcgcgggcgccgactacttc
gctggcggcgatcgggagtggccgccggtgctgtcgcagctgctgaaggaccaccgcgag
gcccgggagggcagcgagctgtgcctctccgcgttcggcggggtggtgtcctacctgaag
gagctctacctcgacaaggaggtgctggcccagggccgcatcaagacctacgccggcacc
accttcgactcgcccaacctcgtcctcgactccaagaccatcaagaacctcgagatcttc
gaaaacacagtcgacggcaagacggaggggacattgctgaagctgatggaccactgctcg
acgcccttcggcaagcggctgttcaagcggtggctggcgatgcctctcaagcgaatccac
gagatcgaggagcgccaaaatgccgtcgaggacttcaacggcagcgaggaccactccacc
acgctcaaggacgccgtcgccctcaacctcaaaggcctgcccgatctggagaggatcgta
tcgcgcatccacgccgggtcgtcgcccatcctcacgttcctcagcgctctggacgcgttc
gatctcttgtggaacatggtgagcgagctgcaaccgctgatcggccaactccgaagcaaa
cgtctggcattcctgctgacggtcgggaagggcttccccgacatcgcgccccagctcgag
tacttttcgcgggccttcgaccgagaccaggccaagagcgagcagcgcctgatcctgcgt
ccgggtgtcgatgaggagttcgatgcggcgagggaaaaggtagaaaccatcgaacagcag
ctgcagcagcacttggaggacctcaaagaggaggtaggcatctctgacatggcctacgcc
accgtccgcaacaaggagtacctcatcgagattccgaggacgcccaagaacgaggcggcg
atcaagcgccataagtcgaccttcatccccatcaacgacaccaagagcgtgggccgctac
tggacgcccaccatctcggccctctttgccgatctggagaaggcccgaaccgaccttgag
cgttgccgcctgggcttgttcgcgcgcaaccagcagaagttttccgagaaccatcgcgaa
tggtcgctggccgttgcctgcatggccgaagtggattgcctgcattcactcgcgatcacc
agttcctcgctgggcgagcccgtgtgtcggccgacgttcgtcgaagcgaaggaggcgttc
ttcgaggccgaggagatgcggcatccgtgcatcagccccaagatcggcgacgaattcata
cccaacaccctgcgcgtgggccatcctcaccagccactcatcctcctcaccggtcccaac
atgggcggtaagtcgacgctgttgagggagacgtgcgtgctggccatcatcgcgcaggtg
ggctgcttcgtcccggccgcctcgtgccgtctttcccccgtcgaccgcatcttcacccga
atcggtgccaacgacaacatcatggcggggcagagtacgttcatgatcgagctgcaggag
acggcgagcatcctgcagcacgccaccccggcttcgctcgtgatcctggacgagctcgga
cggggcacggccaccttcgacggctactcgatcgcgtacgcagtgctggagcacctgtcg
cgcaaggtgggctgccgcacgctgttctccacgcactaccacatgctcacggacgaggtc
gtacgcaacccgcacatcgcgctcaagcacatgtcgtgccacatcgacgacgatcggaag
gaggttacgttcctgtacaaggtggccgatggcgtgtgccccaagagctacggcatgaat
gtcgctcgcatggcgggcgtgaatgaggagattgtggcgagcgcggagaagatcgcccag
aagttcgagggcgagctggccatcgacctccagctcatggagaccgaaaacagtgctacg
gccgatgatgatgacagcagcgacgcgaccacccatggcgcggccgtgggtgacgatgaa
gttgaggccaagtcggaggcggtcggcgcggacgagaaggcgcgggtcgaggagatcgcc
cacctgctgcgcgaggaggaagagaaaggcgtggccggcaggatggccgccttcgcccgc
ctggtcggcctgtggacccaagccacccagtag
DBGET
integrated database retrieval system
