Acanthamoeba castellanii: ACA1_364500
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Entry
ACA1_364500 CDS
T02667
Name
(RefSeq) EH-binding protein, putative
KO
K12816
pre-mRNA-processing factor 17
Organism
acan
Acanthamoeba castellanii
Pathway
acan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACA1_364500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acan03041
]
ACA1_364500
Spliceosome [BR:
acan03041
]
Complex C
Other components
Step II factors
ACA1_364500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_TEP1_C
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
14914540
NCBI-ProteinID:
XP_004335936
UniProt:
L8GMD9
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MDLRSLVNYYQEKDKVGEEKKAQEQSYPQLQQQQQYYQQYYAYYGYGQQPQPSSTDKKRK
AEDAGDAEVQEANDEVKKSKVDDKKGKKKAEEEDEEEEEESSDEDDSSSEEEGEGDGEGK
KLKKKKRREGEAKEYSEFHGDTMYDYQGRTYISPPSNLRAAPHECFMPKKMLHQWRLGAG
KKNKSKRKKAKDLRRKKMRMQQQQKGNKLGNFSVETVISKPQNQDPTNGVNAIRLFPKYG
HLVISANLDGTVKLFDLYNDKRCLRTFYGHTKGVRDIQFNHDGSQFLSTSFDRTIKLWDT
ETGACIQRFSNRKLAYCVKFPPHARDQNQFIAGCSDNRVHQWDIRTGSTVQEYNYHLGPV
NALEFIDEGRRFISSSDDKSLRVWEWGIPVEIKEIREPYLHSMPVMAPHPTDPWIITQSM
DNQILVVSTKDKFRMNKKKRFLGHLVAGYACQLGFSPDGHYVISGDGTGNLWIWDWKTHR
ILKKLECHEKVLIGCEWHPVEPSRVVTCSWDGTIKLWD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggatctgcgctcgctggtaaattactaccaggagaaggataaggtgggcgaggagaag
aaggcgcaggagcagtcatacccgcagctgcagcagcaacaacagtactaccagcagtac
tacgcttactacggctacggccagcagccgcagccatcttcgactgataagaagaggaag
gccgaggatgccggagatgcagaggtgcaagaggccaatgatgaggtgaagaaatcgaaa
gtcgatgataagaagggaaagaagaaagcggaagaggaagatgaagaagaagaggaagag
agcagcgatgaagatgacagcagcagcgaagaggaaggcgaaggggacggcgagggcaaa
aagttgaaaaagaagaagaggagggagggcgaggcgaaggagtactctgaattccacggc
gacaccatgtacgattaccagggccgcacctacatctcgcctccttccaacctgcgagcg
gcgccacacgagtgcttcatgccaaagaagatgcttcatcagtggcgactcggcgccggc
aagaagaacaagagcaagagaaagaaggccaaggatttgaggcgaaagaagatgcgaatg
cagcaacagcagaagggcaacaagctcggcaacttctcggtcgagaccgtcatcagtaag
ccccagaaccaggaccccaccaacggcgtgaatgcgattcggttgttccccaagtacggc
catctcgtgatctcggccaatctcgacggcacggtgaagctgttcgatctctacaacgac
aagcgctgcctgcgcaccttctatggccacaccaagggcgtgcgggacatccagttcaac
cacgacggcagccagttcctcagcacgtcgttcgaccgcacgatcaagctgtgggacacc
gagaccggcgcctgcatccagcggttctccaaccgcaagctcgcctactgcgtcaagttc
ccgccccacgcgcgcgaccagaaccaattcatcgccggctgttccgacaaccgagtgcac
cagtgggacattcgtacgggcagcacggtgcaggagtacaactaccatttgggacccgtc
aacgcgctcgagttcatcgacgagggccgacgattcatttcctcgtccgacgacaagtcg
ctcagagtgtgggaatggggcattccggtggagatcaaggagatccgggagccctacctc
cattcgatgccggtcatggcgccgcacccgacggacccgtggatcattacccagtcgatg
gacaaccagatcctcgtcgtcagcaccaaggacaaattcaggatgaacaagaagaagcgc
ttcctgggccatctcgtcgccggctacgcttgccagctcgggttctcgccggacgggcac
tacgtgatctcgggcgacggcacgggcaacctgtggatctgggactggaagacccaccgc
atcctcaagaagcttgagtgccacgagaaggtgctcatcggctgcgagtggcaccctgtg
gagccctcgcgcgttgtcacctgcagctgggacggtaccatcaagctctgggactga
DBGET
integrated database retrieval system