Acanthamoeba castellanii: ACA1_368870
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Entry
ACA1_368870 CDS
T02667
Name
(RefSeq) ATPdependent RNA helicase DBP2, putative
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
acan
Acanthamoeba castellanii
Pathway
acan03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ACA1_368870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acan03041
]
ACA1_368870
03009 Ribosome biogenesis [BR:
acan03009
]
ACA1_368870
Enzymes [BR:
acan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACA1_368870
Spliceosome [BR:
acan03041
]
Complex A
U1 snRNP components
U1 related factors
ACA1_368870
Complex B
ACA1_368870
Ribosome biogenesis [BR:
acan03009
]
Eukaryotic type
Pre-60S particles
Helicases
ACA1_368870
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P-loop_SecA
ERCC3_RAD25_C
PASTA
HEM4
IF3_N
Motif
Other DBs
NCBI-GeneID:
14919085
NCBI-ProteinID:
XP_004340175
UniProt:
L8GYV4
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
GYSPASSTSSTYRGDDSGSAASGSFFDRIKNSRFEDLVGSLAKPKWEAKAGKLAHFKKDF
YVEHPDVASMPEAEVARILEEAQIKVVDIKPGATPPPRPIVEFSQAGLPRAMVDRLSRNG
ITRPSSIQTQAIPIALSGRDMVGRAQTGSGKTLAFALPACVHIGAQPPLRSGDGPVGLVL
APTRELALQIQAEVARYALLPDGSPLRSACVYGGASKVPQIKDLRRGVHMLIATPGRLLD
LLQMGVTNLERVTYLVMDEADRMLDMGFEQQIRAIVDQIRPDRQTLMWSATWPKEVESLA
QDYLNTPTTVTVGSTELSANPDITQIIDYCRPVEKKPKLLALMDELHKAGHKTLIFVNTK
VSAELLSDELRAKGMKAAAIHGDKTQVMRENVLYQFKRGHVDFLIATDVAARGLDVKNIE
CVVNFDFPGNLEDYVHRIGRTGRAGAKGTAYSFLTNSHDKMIPKLVKILKQAKQEIDPTL
LEMAARASSGQSFHETPSFGQRRAPPGGNTRRDFGRGGERKLKYAINSRGWSADHQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
ggctattcccccgcttcatccacatcttcaacctaccgaggggacgactcgggaagtgcc
gccagcggcagcttctttgatcgcatcaagaattcgcgatttgaagatcttgtaggatca
ctggcgaagcccaaatgggaggccaaggccggcaagctggcccacttcaagaaggacttc
tacgtcgaacacccggacgtggcaagcatgccagaggccgaggtggctcgcatcctcgag
gaagcacagatcaaggtggtcgacatcaagcccggcgccactccgccgccgcgccccatc
gtcgaattctcacaggccggcctgccgcgcgccatggtcgatcgcctctcgcgcaacggc
atcacccggccctcatccatccagacgcaggccatccccatcgccctctccgggcgcgac
atggtgggccgcgcgcagaccgggtcgggcaagacgctcgcctttgccctgccggcgtgc
gtgcacatcggcgcccagccgccgctccgctcgggcgacggacccgtgggcctggtgctg
gcgcccacccgcgagcttgcgcttcaaattcaggccgaggtggcccgctacgcgctgctc
cccgacggctcgccgctccgctcggcgtgcgtctacggcggcgcctccaaggttccccag
atcaaggacctccgacgcggcgtgcacatgttgattgcgacgcccggccgtctgctcgat
ctgcttcagatgggcgtgaccaacctggagcgagtcacctacctcgtcatggacgaggcc
gatcgcatgctcgacatgggcttcgagcagcagattcgtgccattgttgaccagatccgt
cccgaccgccagacgctcatgtggagcgccacgtggccgaaggaggtggagtcgctggcg
caggactacctcaacacgcccaccaccgtcaccgtgggcagcaccgagctctccgccaac
cccgacatcacgcaaatcatcgactactgccgccccgtcgagaagaagcccaagctgctg
gctctgatggacgagctgcacaaggcgggacacaagacgctcatttttgtgaacaccaag
gtgtcggccgagctcttgagcgatgagctcagggccaagggcatgaaggccgccgccatc
catggcgacaagacccaggtcatgcgcgaaaacgtcctctaccagtttaagcgtggccac
gtcgacttcctcatcgccaccgatgtggccgcccgaggccttgacgtcaagaacatcgag
tgcgtggtcaacttcgacttccccggtaatctggaggactacgtgcaccgcattggccgt
acgggccgagctggcgccaagggcaccgcctacagcttcctcaccaattcgcacgacaag
atgatccccaagctggtgaagatcctcaagcaggccaagcaggagatcgacccgacgttg
ttggagatggcggccagagcgtcatcgggccagtccttccacgagacgccgtccttcggc
cagcgacgagccccgccaggcggaaacacgcgtcgcgacttcggtcgcggcggggagcga
aagctcaagtacgccatcaacagccgcgggtggagtgccgaccaccagtga
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