Acanthamoeba castellanii: ACA1_370080
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Entry
ACA1_370080 CDS
T02667
Name
(RefSeq) ATPdependent RNA helicase Ddx1, putative
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
acan
Acanthamoeba castellanii
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acan03041
]
ACA1_370080
03016 Transfer RNA biogenesis [BR:
acan03016
]
ACA1_370080
Enzymes [BR:
acan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACA1_370080
Spliceosome [BR:
acan03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
ACA1_370080
Transfer RNA biogenesis [BR:
acan03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACA1_370080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
DUF3446
IMUP
Motif
Other DBs
NCBI-GeneID:
14919056
NCBI-ProteinID:
XP_004340275
UniProt:
L8GZ36
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MAAAFEEFGVMPELIKAVEELGWTLPTDIQAEAIPLILGGGDVMAAAETGAGKTGAFGLP
VLQIVHEVLREAAMPHQTSSSSSSSSSSSSSSPSTDTAVGTKVALSPDDRDARVAVDARG
LVCQSRDEFQWGGCRATVGVTTGKYYYEAKVTDEGLCRVGWSTRAAALDLGTDAHGYGFG
GTGTHSRFVSNHCKKSNRRQFDTYGEPYGKNDVIGCFIDCDEGTIHFTKNGRSLDKAFDI
PPRGFAFYPAVVLKNAEMEFNFGHSPFKYDPGDYKPISAAPIAETTLGAAGSAGRKGRGP
LAIIIEPTRELAQQTHEQLGLFKKHLTAPSLEILLLVGGMPVPPALNALKHGVDIITATP
GKLMDLIKSGKVDLSDVRFFVLDEADRLVSQAEDAAAISDLYSKLPKAVHRLQVLMFSAT
LHSPEITDMSQKICKFPTWVDLKGKESVPETVHHAIVWADPDKDHSWVSPLKRPKTDGIH
AKDSHPTTKTVATNELHYSQAVKLLKPILVAKVIDAHKMDQALIFVRTRVDADCLEAYFN
DLGGKEKGKRALIEHAYSCASLHSGRSMRERSAALEGFKNGEIRFLICTDVAARGIDIKE
LPYVINVTLPDKSEDYIHRVGRVGRADRLGMAISIVARGKEKVWFHQCKSRGSGCQDVRL
VEEGGCGLWFDEPSYIAAIQKRLGGEPIPELDSNMQLPGASEGEVVYGQKKDQSDSHDTL
IHLQQLTPLVKQLAVLESAAQKQYWNLRCGFSS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcgtttgaagagtttggagtgatgccagagctgataaaggcggtggaggag
ctggggtggactcttcccacagacatccaggctgaggctatcccgctcatcctcggcgga
ggcgacgtcatggccgctgccgagacgggagctggcaagacgggggctttcggtctgccc
gtgctgcagatcgtacacgaggtgctgcgagaagcggccatgcctcaccagacctcgtcg
tcttcctcatcttcatcttcatcttcatcttcatctccctccaccgacactgccgtgggc
acgaaggtagccctgagccctgacgaccgagatgcgcgggtcgcggtggatgcacgcggg
ctcgtgtgccaatcccgtgacgagttccagtggggtggctgtcgcgccaccgtgggcgtc
accacaggcaagtactactacgaggcaaaggtgaccgacgagggtctctgtcgtgtgggt
tggtccaccagggccgctgcgctggatctcggcaccgacgcccacggctacggattcggc
ggcacaggcacacactcgcgcttcgtctctaatcattgcaagaagtccaacaggaggcag
ttcgacacgtacggcgaaccctacggcaagaacgacgtgatcgggtgcttcatcgactgc
gacgagggcaccatccacttcaccaagaacggacgctcgctggacaaggccttcgatatc
ccgcctcgcggcttcgccttctaccccgccgtcgtgctcaagaatgcggagatggagttc
aactttggccattcgccgttcaaatacgacccgggagattacaagcccatctccgcggct
cccatcgccgagaccacgctcggcgccgctgggtcggccggccgcaaaggacgtggcccg
ttggcgatcattatcgagccgacgcgggagctggcgcagcagacacacgagcagttgggc
ctgttcaagaagcacctgacggcgcccagcctggagatccttctgctcgtgggcggcatg
cccgtaccgcccgccctgaacgccctcaagcacggtgtcgacatcatcaccgccaccccg
ggcaagctcatggatctcattaagtcgggcaaggtggacctgtcggacgtgcggttcttt
gtgttggatgaggccgaccgcttggtctcccaggccgaagacgcggcggctatcagtgac
ctctactcgaagctgcccaaggccgtgcaccggctgcaggtgctcatgttctcggccacc
ctgcactcgcccgagatcaccgacatgtcgcagaagatctgcaagttcccgacgtgggtc
gacctcaagggcaaggagagcgtacccgagacggtgcaccacgccattgtgtgggcggac
ccggacaaggaccactcttgggtgagcccgctcaagcggcccaagaccgacggcattcac
gccaaagattcgcacccgacgacgaagaccgtcgccaccaacgagctgcattactcgcag
gccgtcaaactgctcaagcccatcctggtggccaaggtgatcgacgcacacaagatggat
caggcgctcatctttgtgcgaacgcgggtggacgcggactgcctcgaggcctacttcaac
gacctcggcggcaaggagaagggcaagagagcgctcatcgagcatgcctactcgtgcgcg
tcgctgcattcgggccgttcgatgcgggaacggagcgcggcgctggagggcttcaagaac
ggtgagatccggttcctcatctgcaccgacgtggccgctcgcggtatcgacatcaaggag
ctgccctacgtcatcaacgtgacgctgcccgacaagtcggaggattacattcaccgcgtg
ggccgcgtgggccgtgccgatcgcctgggcatggcgatctccatcgtggcgcgaggcaag
gagaaggtgtggttccatcagtgcaagagccgcggctccggctgccaggacgtgcgactg
gtggaggagggcgggtgcggtctgtggtttgacgagccctcctacatcgccgccatccag
aagcgactcggcggcgaacccatccccgagttggacagcaacatgcagctcccgggagca
agcgagggagaggtggtctacgggcagaagaaggaccaatcggacagccacgatacgctc
atccacctgcagcagctcacgccgctggtgaagcagttggccgtgctcgagagcgccgcg
cagaagcagtactggaacctgcgctgcggcttctcctcttga
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