Acanthamoeba castellanii: ACA1_384660
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Entry
ACA1_384660 CDS
T02667
Name
(RefSeq) retinoblastoma binding protein 4 variant isoform 1, putative
KO
K10752
histone-binding protein RBBP4
Organism
acan
Acanthamoeba castellanii
Pathway
acan03082
ATP-dependent chromatin remodeling
acan03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
acan00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
ACA1_384660
03083 Polycomb repressive complex
ACA1_384660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acan03036
]
ACA1_384660
Chromosome and associated proteins [BR:
acan03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
ACA1_384660
Histone modification proteins
HAT complexes
HATB complex
ACA1_384660
HDAC complexes
Sin3A-HDAC complex
ACA1_384660
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
ACA1_384660
PRC2.2
ACA1_384660
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
ACA1_384660
Heterochromatin formation proteins
Other heterochromatin formation proteins
ACA1_384660
Chromatin remodeling factors
NuRD complex
ACA1_384660
NuRF complex
ACA1_384660
NuRF complex (fruit fly)
ACA1_384660
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
CAF1C_H4-bd
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT122_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_WDR11_1st
Beta-prop_SCAP
MIOS_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_RIG_1st
Beta-prop_DCAF4
Beta-prop_LRRK2
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
14922642
NCBI-ProteinID:
XP_004347113
UniProt:
L8HBG1
LinkDB
All DBs
Position
Unknown
AA seq
419 aa
AA seq
DB search
MNPDDATTEDAEEKIINEEYKIWKKNTPFLYDLVMTHALEWPSLTCQWLPDKTTPPGKDY
SVQKLILGTHTSGEEQNYLMIAEVKLPLEDTAIEAGKYDDSKEVGGYGAADGKIEVVMKI
NHDGEVNRARFMPQNHSIIATKTISSEVFIFDYTKHPAKPADDGKCNPEIRLIGHQKEGY
GLSWSPLKEGHLLSAADDGRLCLWDISAVKKTNTTLDAMAVFQGHHESVVEDVAWHLHHD
SYFGSVGDDKKLLIWDTREGKPRHAVQAHTAEVNCLSFNPHSEFILATGSADCTVALWDL
RMLKNKMHSLDSHRDEVLAVQWSPFNEAVLASCGADRRLMVWDQSRIGDEQAGEDAEDGP
PELLFIHGGHTNKISDFGWNANEPWMLASVAEDNILQVWQMAENIYSDEAEPVADSELE
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaacccagacgacgcaacgacggaagacgccgaggagaagatcatcaacgaggagtac
aagatatggaagaagaacacgcccttcctgtacgacttggtgatgacccatgcgctggag
tggccaagcctcacctgccagtggcttcccgacaagacgaccccgcctgggaaggactac
tcggtccaaaagctcatcctgggcacccacacgtcgggcgaggagcagaactacctcatg
atcgctgaggttaagctgccactcgaagatacggcgatcgaggcgggtaaatacgacgat
tcgaaggaggtgggcgggtatggcgctgccgacggcaagatcgaggtcgtgatgaagatc
aatcacgacggcgaagtcaacagggcacgcttcatgcctcaaaatcactcgatcatcgcg
accaagaccatctcttccgaagtcttcatcttcgactacacgaagcatccggccaagccc
gccgacgatggcaagtgcaatcccgagatccgattgatcggccaccagaaggagggctac
ggcctgtcgtggtcgccgctcaaggagggccatctgctgagtgccgccgacgatgggcga
ctgtgcctgtgggacatcagcgccgtcaagaagaccaacacgacgctcgacgccatggcc
gtcttccagggccaccacgaatcggtcgtggaggacgtggcgtggcatcttcaccacgat
tcctacttcggctcggtcggcgacgacaagaagcttctcatctgggacacacgagagggc
aagcctcgacatgccgtccaggcgcacaccgccgaggtcaactgcctctcgttcaatcct
cacagcgagttcatccttgccaccggttcggcagattgcactgtcgcgctgtgggatctg
cgaatgctcaagaacaagatgcactctctcgacagccaccgcgacgaggtgttggccgtc
cagtggtcgcccttcaacgaagcggtcctggcctcgtgcggtgccgacagacgcctgatg
gtgtgggaccagtctcgcatcggcgacgagcaggcgggcgaggacgccgaggacggcccg
cccgagctgctgttcatccacggcggccacacgaacaagatctccgactttgggtggaac
gccaacgagccgtggatgctggcgtccgtggccgaggacaacatcctgcaggtgtggcag
atggccgagaacatctactccgacgaagccgagcccgtcgccgactctgagctggagtaa
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integrated database retrieval system
