Arthrobacter caoxuetaonis: NF551_01610
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Entry
NF551_01610 CDS
T08978
Name
(GenBank) zf-TFIIB domain-containing protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acao
Arthrobacter caoxuetaonis
Pathway
acao03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NF551_01610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acao03400
]
NF551_01610
Enzymes [BR:
acao01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NF551_01610
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NF551_01610
DNA repair and recombination proteins [BR:
acao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NF551_01610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
USQ57588
LinkDB
All DBs
Position
328455..329342
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AA seq
295 aa
AA seq
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MPEMPEVQGLADFLRSKLLPVDAPPAVVSDVEVLSFSVLKTAEVPLDALKDGPVTAVGRR
GKFLIITAGGVHLVIHLAKAGWLRFSDALKPGRLRPGKGAMALRVRFAPQDPAGDEPGFD
LTEAGTKKSLAVYVVRDVEEVPGIARLGPEAFDVDQETFAALVAGHRGQIKGLLRDQSVI
AGVGNAYSDEILHAAHLSPFANASKLTPEEVERLYQAMGAVLESAIENASGRPAAELKDS
KRRALRVHARTGELCPVCGDTVREVSFADSSLQYCPTCQTGGKLLADRRLSKLLK
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagatgcccgaagtgcagggactcgccgacttcctgcggtcaaagctgctgccg
gtggacgccccgcccgcagtggtgtccgacgtcgaagtgctgtccttctctgtactgaag
accgccgaggttccgctggatgccttgaaggacgggccggtgaccgccgtcggccgccgc
ggcaagttcctcatcatcactgccggcggcgttcacctggtgattcatctggccaaggcg
ggatggctgcgcttctccgatgcgctgaagcccggcaggctgcgtccgggcaagggtgcc
atggcattgcgcgtgcggttcgccccgcaggatcccgccggggatgaacccggcttcgat
ctcaccgaggccggcaccaagaagtccctggcggtctatgtggtccgggacgtggaggaa
gtgcccgggatcgcgcggctgggaccggaagcgttcgacgtcgaccaggagacttttgcg
gccctggtcgccggccaccgcgggcagatcaagggcctgctgcgggaccagtcggtcatc
gcgggagtcggcaacgcctacagcgacgagatcctgcacgccgcgcatctctcgccgttc
gccaacgcctcgaagctgactcctgaggaagtcgaacgcctgtaccaggccatgggtgcc
gttttggagtcggcaatcgagaacgcgtccggccgccctgccgcggagctgaaggactcc
aaacgccgggccctgcgggtgcacgccaggaccggggaactgtgtccggtgtgcggggat
accgtgcgtgaagtgtccttcgccgactcgtcgctgcagtactgccccacctgccagacc
ggcgggaaactcctggccgaccgccggctgtccaaactgctgaaatag
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