Arthrobacter caoxuetaonis: NF551_11185
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Entry
NF551_11185 CDS
T08978
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
acao
Arthrobacter caoxuetaonis
Pathway
acao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NF551_11185 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acao03021
]
NF551_11185 (rho)
03019 Messenger RNA biogenesis [BR:
acao03019
]
NF551_11185 (rho)
Transcription machinery [BR:
acao03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NF551_11185 (rho)
Messenger RNA biogenesis [BR:
acao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NF551_11185 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA
Motif
Other DBs
NCBI-ProteinID:
USQ56312
LinkDB
All DBs
Position
complement(2436105..2438318)
Genome browser
AA seq
737 aa
AA seq
DB search
MTDTTDLTAGVDSSASAGSNGETTSKSSGLAGLKLAQLQALAGQLGITGGSRMRKGDLVT
AISNHQRGGAVADRPVRGSKSEAPQTDKAGADRPAKEAGNGESAPAAKAEATDSEQPAER
PARTRNRNRRAASDGVVTPAAGEAAEAAQPEASAPVQETREEGQRERGRNRRNRRNDGEG
STEEAAAQSSGQENAGQENAGQDNGQDKADSGEDRSERQGRNRNRGDRNENRAERGERNE
NRGERENTRGDRNESRGERENTRGDRNESRGERENTRGDRNENRAERENNRGDRNDNRDS
DGDDNSRSGRNRRNRNRNDRNERNDRNDRFRDRNERRRSRDRNPDVDDVEVTEDDVLLPV
AGILDVLENYAFVRTSGYLPGPNDVYVSLAQVKKYNLRKGDAVVGAIRAPRDGENQGNTA
RQKFNALVRLTSVNGKPAEDNKDRVEFNKLVPLYPSERLRLETSPKVIGPRVIDLVAPIG
KGQRGLIVSPPKAGKTLILQAIANAISINNPEVHLMMVLVDERPEEVTDMQRTVKGEVIA
STFDRPADDHTTVAELAIERAKRLVEMGNDVVVLLDSMTRLGRAYNLAAPASGRILSGGV
DSSALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLSRNL
ADKRIFPAVDVNASGTRREENLLSAEEVKIMWRLRRVLSGLDTQQALELLTGKIKETQSN
VEFLMQVQKTTLGSKND
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
gtgacagataccaccgacctgactgcaggtgtggactcatcagcatccgccggttccaac
ggtgaaactacttccaagagctccgggctcgccggcctgaagcttgcacagctgcaggca
ctggccggacaactgggcatcaccggagggtcccgcatgcgcaagggcgatctggtgacc
gccatttcgaaccaccagcgcggcggcgccgtagcggaccgtccggtccgcggatccaag
tccgaagcaccgcagacggataaggcgggcgcagaccgccccgccaaggaagccggaaac
ggcgagtccgctccggctgcaaaggccgaggccacggacagcgagcagccggccgagcgt
ccggcacgcacccgcaaccgcaaccgccgggcagcgagcgacggcgtcgtgacgcccgca
gccggcgaggcagcagaagcagcccagcccgaagcctccgcaccggttcaggaaacccgt
gaagaaggccagcgcgagcgtggccgcaaccgccgcaaccgccgcaacgacggcgagggc
agcaccgaagaggccgcagcccagagctccggccaggaaaatgccggtcaggaaaatgcc
ggccaggacaacggccaggacaaggcagactccggcgaggaccgctccgagcgccagggc
cgcaaccgcaaccgcggtgaccggaacgagaaccgcgcagagcgcggcgaacggaacgaa
aaccgtggcgagcgcgagaatacccgcggcgaccggaacgaaagccgtggcgagcgcgag
aatacccgcggtgaccggaacgaaagccgtggcgagcgcgagaatacccgaggcgaccgg
aacgaaaaccgcgcagagcgcgagaacaaccgcggcgaccgcaacgacaaccgcgactcc
gacggcgacgacaacagccgcagcggacgtaaccgccgcaaccgcaaccggaacgaccgc
aacgagcgcaacgaccggaacgaccggttccgtgaccgcaacgagcgccgccgcagccgc
gaccggaaccctgatgtggacgacgtcgaagttaccgaagacgacgtcctgctgcccgtg
gcaggcatcctggatgtgctggagaactacgcgttcgtccgtacgtccggctacctcccg
ggcccgaacgacgtctatgtttccctcgcccaggtcaagaagtacaacctgcgcaagggc
gacgccgttgttggcgccatccgcgcaccgcgtgacggcgagaaccagggcaacaccgcc
cgccagaagttcaacgcgctggtccgcctgacttccgtcaacggcaagccggccgaggac
aacaaggaccgcgtcgaattcaacaagctggttccgctctacccctccgagcgcctgcgc
ctggagacttcgcccaaggtgattggcccccgcgtcattgacctggtggctccgatcggc
aagggccagcgcggcctgatcgtgtccccgcccaaggccggcaagacgctgatcctgcag
gcgattgccaacgcaatctccatcaacaaccccgaagtgcacctgatgatggtcctcgtg
gacgaacgtcccgaagaagtcaccgacatgcagcgcacggtcaagggtgaagtcattgcc
tcgaccttcgaccgtcccgccgatgaccacaccacggttgccgaactcgccatcgagcgg
gccaagcgcctcgtggaaatgggcaacgacgtcgtcgtcctcctggactccatgacccgc
ctgggccgtgcctacaacctggccgctccggcgtccggccgcatcctctccggcggtgtc
gactcctcggcgctgtacccgccgaagcgcttcttcggtgcagcccgcaacatcgaaaac
ggcggttcgctgaccatcctggccaccgcgctcgtcgagaccgggtccaagatggacgag
gtcatcttcgaggagttcaagggcaccggcaacatggaactgcgcctttcccgcaacctt
gcggacaagcgcatcttcccggccgttgacgtcaacgcctccggtacccggcgcgaagag
aacctgctttccgctgaagaggtcaagatcatgtggcgcctgcgccgcgttctctccggc
ctcgacacccagcaggcgctggaactgctcaccggcaagatcaaggaaacgcagtccaac
gtcgagttcctgatgcaggtgcagaagaccaccctgggcagcaagaacgattag
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