Arthrobacter caoxuetaonis: NF551_11925
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Entry
NF551_11925 CDS
T08978
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acao
Arthrobacter caoxuetaonis
Pathway
acao03420
Nucleotide excision repair
acao03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NF551_11925
03430 Mismatch repair
NF551_11925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acao03400
]
NF551_11925
Enzymes [BR:
acao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF551_11925
DNA repair and recombination proteins [BR:
acao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NF551_11925
MMR (mismatch excision repair)
Other MMR factors
NF551_11925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
PhoH
DUF4813
Motif
Other DBs
NCBI-ProteinID:
USQ56454
LinkDB
All DBs
Position
complement(2605789..2609262)
Genome browser
AA seq
1157 aa
AA seq
DB search
MSVHVGEEVLGEQRKARSYSARQLAELLHGDSAEPVQYPTEAQEAIIEGPLEPLLVVAGA
GSGKTKTMADRVVWLVANGLVEPEQILGVTFTRKAAGELASRIRGRLRLLHRVMGAAADA
PEDSQLEPSVSTYHSYANGIVNDYGLRIGVERDSVMLGGAQSWQLANEVVEAYAGDYEHF
TAAKSTLVGAVLQMASECSEHLCTPAQVRAELERHIAEVQALPYQAGKTKEPAQAATTLL
GKLRTRVSVTELVESYQRAKAERRQLDFGDLVALAARIAEEIPEAVEMERAKYKVVLLDE
FQDTSHAQMVLFSKLFGDGTPVTAVGDPHQSIYGFRGASAGQLGTFRTNFPKVLADGSRT
PAAVANLSVAWRNSTSILATANSVSAPLNQGVPWLKHNRPLDVPELQAKPNARVGDVYLG
RYLTEKTVQLPDGTVSLGEAEALAAQIAGLRTQWWKHPDHETDGRGNLLPPTVAVLCRGK
KQFDPIRRALEAEGIPVQIVGLGGLLSTPEIVDLLAVLRVLGDPGRSDSMLRILAGARWR
IGPADLMALADWSRHLVRVRERAVSVQDLADVDGPDESGAAVVETDLSEAGSLVEAVDYL
PKPGWVSHAGRSLTAAGLARLGALRDELRELRGYVGEDLTTLIGEVERRILLDIEVAAKP
GISIHESRRNLDAFVDAAATFSASADRVDLAAFLAWLEVADEEENGLPVTQLETSREAVQ
LLTVHASKGLEWDVVAVPGLSEGQFPNDKDSRWSSGNEAIPWNLRGDAPDLPQWDWEQPD
QKSWVNAEKLFAEDARGHAEREERRLAYVAFTRARHVLFCSSSAWGGGRSKPTGASRYLL
DLFELGKAGADGFHLLSWLEPGDEGDENPANALTERAAWPKDPLAPARRTSMEAAAAAVL
AAADAGSPGPGLQDRAPGEDNAPLADDAGSVFPPGRWGKDVDLVLARHRAPDEVMQVELP
AHISASMLVDLQDDPEAVTRQLRRPVPREPGMAARKGTAFHAWIEEYFGRSGMLDLDEYP
GAADAYVDEAYQLEDMVATFEASEWAHRTPAFIEVPVETRVESVVVRGRIDAVFRDDDGG
WDLIDWKTGAPPSADKLAVRSVQLAVYRLAWSRLQNVPLEKVRAAFYYVAADKLIRPHNL
LDAAELEKIIASSAPGA
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtccatgttggggaagaggtgctgggggaacagcggaaggcacggtcctactct
gcgcgtcagctcgccgagctgctgcacggggattcggccgagccggtccagtacccgacc
gaggcacaggaagcgatcatcgaaggcccccttgaaccgctcctggtagtggccggtgca
ggctcgggaaagaccaaaacgatggcggaccgggtggtctggctggtggccaacgggctc
gtggagcccgaacagatcctcggtgtgaccttcacgcggaaggcggcaggcgaacttgcc
tcccgcatccgggggaggcttaggctgctgcaccgtgtgatgggtgccgcagcggacgcc
ccggaggacagccagctggaaccgtcggtgtccacctaccactcctacgccaacggaatc
gtgaacgactacggcctgcggatcggcgtcgaacgcgactccgtgatgctgggcggagcg
cagtcctggcagctggcgaacgaagtcgtggaggcctacgcgggagactacgaacacttc
acggcagccaaatccacgctcgtcggggccgtcctgcagatggcatcggaatgctcggag
cacctgtgcactccggcccaggtgcgcgccgagctggagcggcacattgccgaggtccag
gcgctgccctatcaggccggcaagaccaaggagcccgcccaggcagccacaaccctgctc
ggcaagctccgtacccgggtctccgtcacggagctggtggagtcctaccagcgtgccaag
gctgagcggcggcagctggacttcggcgacctggtggcgctggccgcccggatcgccgag
gaaattccggaagcagtggagatggagcgcgccaagtacaaggtagttctcctggacgag
ttccaggacacctcgcatgcgcagatggtcctgttctccaagctgttcggggacgggacg
cccgtgaccgcagtcggcgatccgcaccagtccatctatggtttccgcggcgcatctgcc
ggacagctggggacgttccgcaccaatttccccaaggtcctggctgacggcagcaggaca
cccgccgccgtcgctaatctttcggtcgcctggcggaactccacctccatcctcgccacc
gccaactccgtctcagcaccgctgaaccagggcgtgccgtggctgaagcacaaccggccg
ctggacgtccccgaactccaggcgaagccgaacgcccgcgtcggagatgtctaccttggc
cgttacctcacggagaagacggtccagctgcccgacgggacggtgagcctgggggaagcc
gaggccctggcagcgcagatcgccggcctgcggacacagtggtggaaacatcccgaccac
gagacggacggccggggaaacctgcttccccccaccgttgcggttctctgccggggaaag
aagcagttcgacccgatccgccgtgctttggaggcagaggggatccccgtccagatcgtc
gggctgggcggcctgctttcgacgccggaaatcgttgacctgcttgctgtcctgcgcgtg
ctcggggatcccgggcgttcggattcaatgctgaggatcctggccggagcgcgctggcgg
atcggtccggcggacctcatggccctggccgactggtcacggcatctggtgcgggtacgg
gaacgcgctgtcagtgtccaggacctggccgacgtcgacggtcccgacgaaagcggagcc
gcagtcgtcgagactgatctgtccgaagcaggcagtctcgttgaagccgttgattacctc
cccaaaccggggtgggtgtcccatgccggacggtcactgacagccgccggcctggcccgc
ctgggcgccctgcgtgatgagctgcgggaactgcgcggctatgtgggggaggacctcacc
accctcattggcgaagtggaacggcgcatccttctggatatcgaagttgcggcaaaaccg
ggcatcagcatccacgaatcccggcggaacctcgacgctttcgtcgacgccgccgccacc
ttcagcgcttcggcggaccgcgtggaccttgcggccttccttgcctggctcgaggtcgcg
gatgaggaagagaacgggcttccggtgacccagctggagaccagcagggaagcggtccag
ctgctgaccgtccatgcgtccaagggactcgagtgggacgtcgtcgccgtccccggactc
agcgagggccagttccccaacgacaaggactcgcgctggagcagcggcaacgaagctatc
ccgtggaaccttcgcggggacgcgccggatcttccgcagtgggactgggagcagccggac
cagaagtcgtgggtcaacgccgaaaagctcttcgccgaggatgcccgcgggcatgccgaa
cgcgaggagcgccgcctggcctatgttgccttcacccgggcaaggcacgtcctgttctgc
tcctcaagcgcctggggcgggggccggtccaagccgacgggggcctcccgctacctgctt
gacctcttcgaactcggaaaagccggagcggacggcttccatctgctgtcctggctggaa
cccggggatgagggagatgagaaccctgccaacgctctgacggagcgggccgcctggccc
aaggacccgctggcaccggcgcgccggacctcaatggaggcagctgcagcagccgtcctg
gcagcggccgacgccggttcccctggcccgggcctccaggatcgtgcccctggagaggac
aacgcacccctggcagatgatgccgggtcggtgtttccgccgggtcgctgggggaaggac
gtagacctggtcctggcccggcaccgcgctccggatgaggtgatgcaggtggaactgccc
gcccatatttcggcctccatgctggtggacctgcaggatgacccggaagccgtgacccgg
cagctgcgccggccggttccccgggaacctggaatggcggcacgcaaaggcacggcgttc
cacgcctggatcgaggagtatttcggccgcagcggaatgctcgacctcgacgaatacccg
ggcgcggccgatgcctacgtggatgaggcataccagcttgaggacatggtggcgacgttc
gaagcgtctgagtgggcacaccggactccggccttcatcgaggtgccggtggagaccagg
gtggaatccgtagtggtccgcgggcggatcgacgcggtcttccgcgatgacgacggcggc
tgggacctgatcgactggaagaccggtgcccctccgtctgccgacaagctcgccgtccgc
tcagtgcagctggcggtctaccgtttggcctggtcccgactgcagaacgttccgctggaa
aaggtccgtgctgccttctactacgtcgccgcggataagctcatccgtccgcacaacctg
ctggacgctgcggaactggaaaagatcatcgccagctctgctccgggggcctga
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