Actinomyces capricornis: MANAM107_00990
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Entry
MANAM107_00990 CDS
T09393
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acap
Actinomyces capricornis
Pathway
acap03030
DNA replication
acap03430
Mismatch repair
acap03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MANAM107_00990
03430 Mismatch repair
MANAM107_00990
03440 Homologous recombination
MANAM107_00990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acap03032
]
MANAM107_00990
03400 DNA repair and recombination proteins [BR:
acap03400
]
MANAM107_00990
Enzymes [BR:
acap01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MANAM107_00990
DNA replication proteins [BR:
acap03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MANAM107_00990
DNA repair and recombination proteins [BR:
acap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MANAM107_00990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
HHH_3
DNA_pol_IIIA_C
DUF655
Motif
Other DBs
NCBI-ProteinID:
BDA63265
UniProt:
A0ABN6K0Z4
LinkDB
All DBs
Position
complement(122151..125750)
Genome browser
AA seq
1199 aa
AA seq
DB search
MGHTSSDEAGQEQAARDDFVHLHVHTDYSMLDGAGKIKDYVAEAKRLGQPALAITDHGYM
FGAYEFYSAAKAAGIKPIIGVEAYMTPGTSRLDKTRVFWGDESQRSDDVSARGSYTHMTL
LSRNDEGLHNLMRMDSLASLEGQWGKAPRMDRELLGRYASGLIGTTGCPSSEVQTRLRLG
QWDEALRCAGELQDIFGRDFFYVELMDHGLEIERRVTKDLLRLAETIGAPLLATNDSHYV
RPEDHEVQDAMLCINSGSVLSDPDRFKFDGNTYYLRPGREMRQLFSEMPGACDNTLLVAE
QCEVQFKTVDEGASFMPVFPVPEGETMESWFVKECWRGMERRFHGSIPEDCRKQAEYEIS
VIVQMGFPGYFLVVADYINWAKAQGIRVGPGRGSGPGSMVAYAMGITELNPLNHGLIFER
FLNPERISMPDIDVDFDERRRDEVIGYVRDKYGADRTSQVVTYGVIKAKQSLKDSSRVLG
YPYAVGDRLTKAMPPTIMGKDITIKGMFNPEDKRYGEAEEFRKLHSEDADAQRIVDLAKG
LEGMTRQWGVHACAVIMSSDPLIDIIPMMQRLQDGAVITQFDYPTCEHLGLLKMDFLGLR
NLTVISDALDNIVANGKPALDIDHIELDDAATYQMLSRGETLGVFQLDGGGMRTLLRLMK
PDNFEDISAVSALYRPGPMGADSHTNYALRKNGQQEIVPIHPELQEALEPILGTTHGLIV
YQEQVMKIAQELAGFSMGSADKLRKAMGKKKPEILAKEYVGFRKGMRDNGFSEESIKALW
DVVVPFSAYAFNKAHSAAYGVVSYWTAFLKCHYPTEYMAAVLTSMGDNKDKMAIYLGECR
RMGITVLPPDVNTSAVRFSAVGEDIRFGMAAVRNVGVNVVEAIIAAREEKGEFTSFEDFL
DKVPAVVCNKRTIDSLIKAGAFDSLGYSRRALQACHEDFVDEVIGVKRNEAAGQFDLFGS
LLDDGADGAGPFASGPVFSSEVPSLPEWDKKDKLAYERDMLGLYISDHPLMGLEGLLGKL
ADREISELHEDDKLPDGAMVTIAGLITSLTRKTTKQGNLWAIAQVEDLAGSVEVLFFPQT
YQTVSTMLAPDTVVTVRGRLSRRDGQTAVYAQEMTIPDVSSATNEAVSITLPTNRCTGPL
VERFKDVLQRHPGTSPVRLTLTSPGREVRTQLGSSLRVQASAAFYSDIKTLLGPGCLRR
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
atggggcacacgagcagcgatgaggcagggcaggagcaggcggccagggacgacttcgtc
cacctccacgtccacaccgactactccatgctcgatggggcgggcaagatcaaggactac
gtggccgaggccaagcgcctgggccagccggccctggccatcaccgaccacggctacatg
ttcggcgcctacgagttctactccgccgccaaggccgccggcatcaagccgatcatcggg
gtcgaggcctacatgacccccgggacctcccgcctggacaagacccgcgtgttctggggc
gatgagtcccagcgcagcgacgatgtctcggcccgcggctcctacacccacatgaccctg
ctctcgcgcaacgacgagggcctgcacaacctcatgcgcatggactccctggcctccctg
gagggccagtggggcaaggccccgcgcatggaccgcgagctgctggggcgctacgcctcc
ggcctcatcggcaccaccggctgcccctcctcggaggtccagacgcgcctgcgcctgggc
cagtgggacgaggcgctgcgctgcgccggggagctccaggacatcttcgggcgcgatttc
ttctacgtcgagctcatggaccacggcctggagatcgagcggcgcgtgaccaaggacctg
ctgcgcctggccgagaccatcggcgcccccctgcttgccaccaacgactcacactacgtg
cgccctgaggaccatgaggtccaggacgccatgctgtgcatcaactccggctcggtgctc
tccgaccccgaccgcttcaagttcgacggcaacacctactacctgcgcccgggccgtgag
atgcgccagctcttctccgagatgcccggggcctgcgacaacaccctcctggtggccgag
cagtgcgaggtgcagttcaagaccgtcgacgagggcgcctccttcatgcccgtcttcccc
gtgcccgagggcgagaccatggagtcctggttcgtcaaggagtgctggcgcggcatggag
cgccgcttccacggctccatccccgaggactgccgcaagcaggccgagtacgagatcagc
gtcatcgtccagatgggcttccccggctatttcctggtggtggccgactacatcaactgg
gccaaggcccagggcatccgcgtggggccgggccgtgggtcgggccccggatccatggtg
gcctacgccatgggcatcaccgagctcaaccccctcaaccacgggctcatcttcgagcgc
ttcctcaaccccgagcgcatctccatgcccgatatcgacgtcgacttcgatgagcgccgg
cgcgacgaggtcatcggctacgtccgcgacaagtacggggccgaccgcaccagccaggtg
gtgacctacggcgtcatcaaggccaagcagtccctgaaggactccagccgggtcctgggc
tacccctacgcggtgggcgaccgcctgaccaaggccatgccccccaccatcatgggcaag
gacatcaccatcaaggggatgttcaaccccgaggacaagcgctacggggaggccgaggag
ttccgcaagctccactccgaggacgccgacgcccagcgcatcgtggacctggccaagggc
ctggagggcatgacccgccagtggggcgtgcacgcctgcgcggtcatcatgtcctccgac
ccgctcatcgacatcatccccatgatgcagcgcctccaggacggggcggtcatcacccag
ttcgactaccccacctgcgagcacctgggcctgctcaagatggacttcctggggctgcgc
aacctcacggtcatctccgatgcgctggacaacatcgtggccaacggcaagcccgccctg
gacatcgaccacatcgagctcgacgacgccgccacctaccagatgctctcgcgcggggag
accctgggcgtcttccagctcgacggcggcggcatgcgcaccctgctgcgcctgatgaag
ccggacaacttcgaggacatctccgccgtctcggccctctaccgccccgggcccatgggg
gcggactcccacaccaactacgccctgcgcaagaacggccagcaggagatcgtccccatc
caccccgagctccaggaggcactggagcccatcctgggcaccacccacggcctcatcgtc
taccaggagcaggtgatgaagatcgcccaggagctcgccggcttctccatgggcagcgcg
gacaagctgcgcaaggccatgggcaagaagaagcccgagatcctggccaaggagtacgtg
ggcttccgcaaggggatgcgggacaacggcttctccgaggagtccatcaaggccctgtgg
gacgtggtggtgcccttctcggcctacgccttcaacaaggcccactccgcggcctacggc
gtggtctcctactggacggccttcctcaagtgccactaccccacggagtacatggccgcg
gtcctgacctccatgggggacaacaaggacaagatggccatctacctgggcgagtgccgt
cgcatgggcatcacggtgctgcccccggatgtcaacacctcggcggtgcgcttctccgcc
gtgggcgaggacatccgcttcggcatggcggcggtgcgcaacgtgggcgtcaacgtcgtg
gaggccatcatcgccgcccgtgaggagaagggggagttcaccagcttcgaggacttcctg
gacaaggtgcccgcggtggtgtgcaacaagcgcaccatcgactccctcatcaaggccggg
gccttcgactccctgggctactcccggcgcgccctgcaggcctgccacgaggacttcgtg
gatgaggtcatcggcgtcaagcgcaacgaggccgccggccagttcgacctgttcggctcg
ctgctcgacgatggcgcggacggcgccggccccttcgcctccggcccggtcttctcctcc
gaggtgccctccctgcccgaatgggacaagaaggacaagctggcctacgagcgcgacatg
ctcggcctctatatctccgaccacccgctcatgggactggagggcctgctgggcaagctg
gccgatcgggagatctccgagctgcacgaggatgacaagctgcccgacggcgccatggtc
accatcgccggcctcatcacctccctgacccgcaagaccaccaagcagggcaacctgtgg
gccatcgcccaggtcgaggacctggctggaagcgtggaggtcctcttcttcccgcagacc
taccagacggtctcgaccatgctggcccccgataccgtggtcaccgtgcgcgggcgcctg
agccgccgtgacgggcagacggccgtctacgcccaggagatgacgatccccgacgtctcc
agcgccacgaacgaagcggtatcgatcacacttcccacgaaccggtgcaccggaccgttg
gtggagcgattcaaggatgtgctccagcgccacccggggacctccccggtgcgcctgacg
ctgaccagcccgggcagggaggtgcgcacccagttggggtcttcactgcgagtccaggca
tcggcggccttctactccgatatcaagacgctcctggggccgggctgcctgcgccggtga
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