Actinomyces capricornis: MANAM107_13940
Help
Entry
MANAM107_13940 CDS
T09393
Name
(GenBank) hypothetical protein
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
acap
Actinomyces capricornis
Brite
KEGG Orthology (KO) [BR:
acap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acap03019
]
MANAM107_13940
Enzymes [BR:
acap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MANAM107_13940
Messenger RNA biogenesis [BR:
acap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MANAM107_13940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_19
AAA_22
WHD_HA2
nSTAND3
nSTAND_NTPase5
T2SSE
NACHT
PhoH
SLFN-g3_helicase
TsaE
Motif
Other DBs
NCBI-ProteinID:
BDA64560
UniProt:
A0ABN6K923
LinkDB
All DBs
Position
complement(1717971..1722893)
Genome browser
AA seq
1640 aa
AA seq
DB search
MEHGQNEQNRSAQGQATGSASHGDRQHRGRGAEVGQGAEPASTDGAATDHDRPRSGEEQG
HGSHSRPSTRRHGRGRRKGRPRRGPDHPRRGYTPEQVEARHQAVPAIVYPDQLPVSARRE
EIAEAIRDHQVVIVAGETGSGKTTQLPKICLELGRGVTGMIGHTQPRRIAARSVAERIAH
ELGTRIGREGIVGYQVRFTEEVGPTTLVKLMTDGILLAEIQSDPQLSRYDTIIVDEAHER
SLNIDFILGYLARLLPSRPDLKVIITSATIDSERFARHFGQRAARAGADGQEVSAVVPAP
VIEVSGRTYPVEIRYRPLIADDDAPDDPQDGAAPTAGSGGGPAASPAPGELSEAELEALT
SPDPQVRAAARARREAARASASADSTAPGPAGRGARAARGRPASPGPQEERDQVTGILDA
VDELMAAGPGDILVFLAGERDIRDTEAALIDHLGPRHTPDGRSSVPGAVEIVPLYSRLSA
AEQHRVFQAHSTRRIVLATNVAETSLTVPGIRYVIDPGLARISRYSNRTKVQRLPIEAVS
QASANQRSGRCGRVADGIAIRLYSQADFDSRPQYTEPEILRTSLASVILQMAALGLGAVE
DFPFLDAPDPSQVRSGIQLLTEIGAIETAASRGPGHERRGQGGPRLTAIGRRLARLPIDP
RLGRMLLEAGELGCAGEVMVIVAALSIQDVRERPADRQEASDAMHRRFADPTSDFLTYLN
LWRYLRTQGRELSGSAFRRMCRSEFLHYLRVREWQDVHAQLRELARPLGLSAAPIELPTA
RAIRAATEALEPGSHAAQIAHGGVAAAVVALGRSADTPDADAIHRSLLTGLLSNVGNWDE
RRRDYAGARGTRFTIWPGSGLRRKTYDWVMTAELVETSRLFARTVAKVDSRWVEEAAERA
GLLRRVYGEPYWSTRQGAAMVHEKVMLYGMTLAADRPATLASVNAAAGEVAREMFLRQGL
VEGGWHARHAFVARNRALIEELGDVERRRRVHGLLADDQALFDFYDDRVPEAITSAAAFD
AWWKDQRRATPELLDFTRELLLPGGDDASGYPDTWVQGDLTLPLAYVFEPGRHDDGVSVQ
VPVEILGRLEPVGFDWLVPGMRPELCVATIRALPKRVRRQLVPAPDVGAQIHAALVEHYP
TPPGASAPEVPFEEAFSAVARRLKDVEITEADWQEAAERQPDHLRMAFVATDERGHVLGR
SKDLVALSRRLSGRTEEAVRSVVRGALAQAMEEAQDRQGTRGRKGRKGAKGRRSTQGADG
GAPGANQGAGPSGARDGAGGPAPVGADSGAPQAPTGSAVRSGLAEREGLTDWPSDVPGLG
APQRSTIPATVESTGRAGLVVRGYPALLASGGAARLRPEPASSTASASQAGRGQQAPSAD
LRILPDAVAQAREHGAGVTALALARTILPAGRVSSRWSGQEALTLAASPYPSTEALVADL
QLAAARSVAGRWAAATKRALDRVRERTVFGELVGVMREELEDEVHRLALIVVRILSAQRE
VERAVGAHTSLSLLTTLQEVREHAAQLVSDGFVSATPDDQLAHLPRYLTALAMRVERAAS
SPSAASQDAALAYQVSQVVTAVDQARARAAALPPDAQREARLVEARWMVEELRVSLFAQT
LGTSRKVSPQRITKLLASIT
NT seq
4923 nt
NT seq
+upstream
nt +downstream
nt
atggaacacggccagaacgagcagaaccgcagcgcccaggggcaggcgaccggatccgcg
agccacggcgatcgccagcatcgggggcgcggcgccgaggtcgggcagggcgcagagccc
gccagcaccgacggcgccgccacggatcacgaccgcccgcgcagcggcgaggagcagggg
cacggctcccactcccggccctccacccgccggcacggtcgcggccggcgcaagggccga
ccccgccgcgggcccgaccacccccgccgcggctacacccctgagcaggtcgaggcccgc
caccaggcggtccccgccatcgtctaccccgaccagctcccggtctccgcgcgccgcgag
gagatcgccgaggccatccgcgaccaccaggtggtcatcgtggccggggagaccggcagc
ggcaagaccacccagctgcccaagatctgcctggagctgggccgcggggtcaccggcatg
atcggccacacccagccgcggcgcatcgcggcgcgctccgtggccgagcgcatcgcccac
gagctgggcacccgcatcgggcgcgagggcatcgtgggctaccaggtgcgcttcaccgag
gaggtgggccccaccaccctggtcaagctcatgaccgacggcatcctgctggccgagatc
cagtccgacccccagctctcccgctacgacacgatcatcgtggacgaggcccatgagcgc
agcctgaacatcgacttcatcctgggctacctggcccgcctgctgcccagccgcccggac
ctcaaggtcatcatcacctcggccaccatcgactccgagcgcttcgcccgccacttcggg
cagcgcgcggcccgcgccggcgccgacggccaggaggtctccgccgtggtgccggcaccg
gtcatcgaggtctccgggcgcacctaccccgtcgagatccgctaccgcccgctcatcgcc
gacgacgacgcccccgacgacccgcaggacggcgccgcacccaccgccggcagcggtggc
gggcccgccgcctcgcccgccccgggggagctgagcgaggccgagctggaggccctgacc
tcccccgatccccaggtgcgcgcggccgcccgggcgcgccgcgaggccgcgcgggcctcg
gcctcggctgattccaccgccccgggccccgcgggccggggcgcccgagccgcgcgcggc
cgccccgccagccccggcccccaggaggagcgcgaccaggtcaccggcatcctggatgcc
gtcgatgagctcatggcggcgggccccggggacatcctggtcttcctggccggggagcgg
gatatccgggacaccgaggcggccctcatcgaccacctggggccccgacacacccccgat
ggccgctcctcggtccccggcgccgtggagatcgtccccctctactcgcgcctgtcggcc
gccgagcagcaccgggtcttccaggcccactccacgcgcaggatcgtcctggccaccaat
gtcgccgagacctccctgacggtgccgggcatccgctacgtcatcgacccgggcctggcc
cgcatctcgcgctactccaaccgcaccaaggtccagcgcctgcccatcgaggccgtcagc
caggccagcgccaaccagcgctcgggccgctgcggccgcgtggccgacggcatcgccatc
cgcctgtactcccaggcggacttcgactcccgcccgcagtacaccgagcccgagatcctg
cgcacctccctggccagcgtcatcctgcagatggcggccctggggctgggcgccgtcgag
gacttccccttcctggatgcgcccgaccccagtcaggtgcgcagcggcatccagctgctc
accgagatcggcgcgatcgagacggcggcctcccggggccccggccacgagaggcgggga
cagggcggcccgcgactgacggccatcggccgccgcctggcgcgcctgcccatcgacccc
cgcctggggcgcatgctcctggaggccggcgagctgggctgcgccggggaggtcatggtc
atcgtggccgcgctgtccatccaggatgtgcgcgagcgcccggccgaccgccaggaggcc
tccgatgccatgcaccgccgcttcgccgaccccacgagcgacttcctgacctacctcaac
ctgtggcgctacctgcgcacccagggccgcgagctgtcgggctcggccttccgccgcatg
tgccgctcggagttcctccactacctgcgggtgcgcgagtggcaggacgtccacgcccag
ctgcgcgagctggcccgccccctggggctgagcgcggcccccatcgagctgccgaccgcc
cgcgccatccgcgccgccaccgaggccctggagccgggctcccacgccgcccagatcgcc
cacgggggtgtggcggccgccgtggtcgccctgggccgcagcgccgacaccccggatgcc
gatgccatccaccgcagcctgctgacaggcctgctgtccaacgtgggcaactgggatgag
cggcgccgcgactacgccggggcccggggcacgcgcttcaccatctggccgggcagcggg
ctgcgccgcaagacctacgactgggtgatgaccgccgagctggtggagacctcccggctc
ttcgcccgcacggtcgccaaggtggactcccggtgggtggaggaggccgccgagcgggcc
gggctgctgcgccgcgtctacggcgagccctactggtccacgcgccagggcgccgccatg
gtccacgagaaggtcatgctctacggcatgacgctggcggcggaccgccccgccaccctg
gcctcggtcaatgccgccgccggggaggtggcccgtgagatgttcctgcgccagggcctg
gtcgagggcgggtggcacgcccgccacgccttcgtggcccgcaaccgggccctgatcgag
gagctgggggatgtcgagcgccggcgtcgcgtccacgggctgctggccgacgaccaggcc
ctcttcgacttctacgacgaccgtgtgcccgaggcgatcacctcggcggccgccttcgac
gcctggtggaaggaccagcggcgcgccacccccgagctgctggacttcacccgcgagctg
ctgctgcccggcggggatgatgccagcggctaccccgacacctgggtgcagggcgatctg
accctgccgctggcctacgtcttcgagcccgggcggcacgacgacggcgtgagcgtgcag
gtgccggtggagatcctggggcgcctggagccggtgggcttcgactggctggtgccgggc
atgcgccccgagctgtgcgtggccacgatccgggccctgcccaagcgggtgcgccgccag
ctggtgcccgctcccgatgtgggggcgcagatccatgccgccctggtggagcactacccg
acgccgccgggcgcctcggcgcccgaggtccccttcgaggaggccttcagcgccgtggcc
aggcggctgaaggatgtggagatcaccgaggccgactggcaggaggccgccgagcgccag
cccgaccacctgcgcatggccttcgtcgccaccgatgagcgcgggcacgtcctggggcgc
tccaaggacctggtggcgctcagccggcgcctgtcgggccgcacggaggaggcggtgcgc
tccgtggtgcgcggcgccctggcccaggccatggaggaggcgcaggaccgccagggcacc
cgcgggcgcaagggccgcaagggcgccaaggggcgccggtccactcagggcgccgacggc
ggggctccaggcgcgaatcagggcgcgggcccctcaggggcccgggacggagccgggggc
ccggcccctgtgggggccgactcgggggccccgcaggctcccaccgggtccgcggtccgc
tcggggctggccgagcgcgagggcctgaccgactggcccagcgacgtgccgggcctgggg
gccccgcagcgctccacgatcccggccacggtggagtccaccgggcgggcgggcctggtg
gtgcgcggctaccccgcgctcctggcctccgggggtgcggcgcgcctgcgcccggagccg
gccagcagcacggcatcggcctcgcaggcgggccgcgggcagcaggcgcccagcgcggat
ctgcgcatccttcccgacgccgtcgcccaggcccgtgagcatggcgccggggtgaccgcc
ctggctctggcgcgcaccatactgcccgcgggcagggtcagcagccggtggagcgggcag
gaggcactcaccctggcggcctccccctaccccagcacggaggcgctggtggcggatctg
cagctcgcggcggcgcgcagcgtggccggccggtgggccgccgcgaccaagcgggcactg
gaccgggtgcgcgagcgcaccgtcttcggcgagctggtgggtgtcatgcgcgaggagttg
gaggatgaggtccaccgcctcgccctcatcgtcgtgcgcatcctgtcggcccagcgggag
gtggagcgggcggtgggagcgcacacctccctgtccctgctcaccacgctccaggaggtg
cgcgagcatgcggcgcagctggtcagcgacggcttcgtctcggcgacgccggatgatcag
ctggcccatctgccccgctatctcaccgccctggcgatgcgggtggagcgggctgcctcc
tcgccgtcagcggcctcccaggatgcggccctggcctaccaggtctcccaggtggtcacg
gcggtcgatcaggcccgggcgcgggcagcggccctgcccccggacgcgcagcgcgaggcg
cgactggtcgaggcccggtggatggtcgaggagctgcgggtcagcctgttcgcccagacc
ctggggacatcccgcaaggtcagcccccagcgcatcaccaagctcctggcctcgatcacc
tag
DBGET
integrated database retrieval system
