Actinomyces capricornis: MANAM107_20030
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Entry
MANAM107_20030 CDS
T09393
Symbol
rnj
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
acap
Actinomyces capricornis
Pathway
acap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MANAM107_20030 (rnj)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acap03019
]
MANAM107_20030 (rnj)
Messenger RNA biogenesis [BR:
acap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MANAM107_20030 (rnj)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
BDA65169
UniProt:
A0ABM7UDA5
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All DBs
Position
2432248..2433933
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AA seq
561 aa
AA seq
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MTYFPALKAPGPLAEGTMRITPLGGLGEVGRNMTVFELDSQLLIVDCGVLFPEEHQPGVD
LILPDFSSIEDRIDDVVALVLTHGHEDHIGAVPYLLRLREDIPLVGSGLTLAFVEAKLKE
HRLTPVLRQVTEHERVDYGPFDLEFVAVNHSIPDAMAVMIRTSAGNVLATGDFKMDSLPI
DGRITDLRSFARFGEEGVDLFCVDSTNAEVPGMIGHESKIGPVLDQVFAESDGQIVVASF
ASHVHRVQQVLDAAALHGRRVALVGRSMVRNMGIAAERGHLKVPDGVLIDPRDVTSLPPQ
ERVLMVTGSQGEPMAALSRMAHSEHRTVTIEPGDTVIFASSLIPGNENSVFRVINQLMRL
GARVVHQGNATVHVSGHASSEELLHVYNIVQPRNVMPIHGEIRHLVANGALAVKTGIDPD
RVVLCEDGVAVDLKDGVARIAGQIPCGYIYVDGASVGEIDESELKDRRILAEEGFVSVYA
VVETKTGTILAGPHIQARGMAEDDSVFDEILPEVTEALAAALASGNADSHSLAQVMRRTL
GRYVGRRLKRRPMIVPVVIEA
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
gtgacgtactttcccgcactcaaggcacccgggcccctcgccgagggcaccatgcgcatc
acgcccctgggagggctcggcgaggtcgggcgcaacatgaccgtcttcgagctggactcc
cagctcctcatcgtcgactgcggcgtcctgttccccgaggagcaccagcccggcgtcgac
ctcatcctgcccgatttctcctccatcgaggaccgcatcgatgacgtcgtcgccctggtc
ctgacccacgggcacgaggaccacatcggcgcggtcccctacctgctgcgcctgcgcgag
gacattcccctggtgggaagcggcctgaccctggccttcgtggaggccaagctcaaggag
caccgcctcacccccgtcctgcgccaggtcaccgagcacgagagggtcgactacgggccc
ttcgacctggagttcgtggcggtcaaccactcgatccccgacgccatggccgtcatgatc
cgcaccagcgccggcaacgtcctggccaccggcgacttcaagatggactccctgcccatc
gacgggcgcatcaccgacctgcgctccttcgcccgcttcggagaggagggcgtggacctg
ttctgcgtggactccaccaacgccgaggtccccggcatgatcgggcatgagagcaagatc
ggcccggtcctggaccaggtcttcgccgagtccgacggtcagatcgtcgtcgcctccttc
gccagccacgtccaccgcgtccagcaggtgctcgacgccgccgccctccacggccgccgc
gtggccctggtggggcgctccatggtgcgcaacatgggcatcgccgccgagcgcggccac
ctcaaggtgcccgacggcgtcctcatcgacccccgtgacgtcacctccctgccgccccag
gaacgcgtcctcatggtcaccggcagtcagggcgagcccatggccgccctcagccgcatg
gcccactccgagcaccgcacggtcaccatcgagccgggcgacaccgtcatcttcgcctcc
tccctcatcccgggcaacgagaactccgtcttccgggtcatcaaccagctcatgcgactg
ggggcgcgcgtggtccaccagggcaacgccaccgtgcacgtctcggggcatgcctcctcc
gaggagctcctccacgtctacaacatcgtccagccccgcaatgtcatgcccatccacggc
gagatccgccacctggtggccaacggggcgctggcggtcaagaccgggatcgaccccgat
cgcgtcgtgctgtgcgaggacggggtggccgtggacctcaaggacggggtggcccgcatc
gccgggcagatcccctgcggctacatctacgtcgacggcgcctcggtgggggagatcgac
gagagcgagctcaaggaccggcgcatcctggccgaggagggcttcgtctcggtctacgcg
gtggtggagaccaagaccggcaccatcctggccggcccccacatccaggcccggggcatg
gccgaggacgactcggtcttcgacgagatcctccccgaggtcaccgaggcgctggccgcc
gccctggcctcgggcaacgccgactcccactccctggcccaggtgatgcgccgcaccctg
gggcgctacgtgggccgcaggctcaagcgccgccccatgatcgtgcccgtcgtcatcgag
gcctga
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