Actinomyces capricornis: MANAM107_20630
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Entry
MANAM107_20630 CDS
T09393
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acap
Actinomyces capricornis
Pathway
acap03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acap00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MANAM107_20630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acap03400
]
MANAM107_20630
Enzymes [BR:
acap01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MANAM107_20630
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MANAM107_20630
DNA repair and recombination proteins [BR:
acap03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MANAM107_20630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DZR
Motif
Other DBs
NCBI-ProteinID:
BDA65229
LinkDB
All DBs
Position
2503760..2504860
Genome browser
AA seq
366 aa
AA seq
DB search
MPELPEVESVRAGLARHLTGRTITAVEVLDPRPLRRQDGGPQAFCDQLTGRSITAAVRRG
KFLWLPLDDGRALSAHLGMSGQLLVRGTGAPGPGQGAAQAGDERVGEGPAVGGGADPDPF
LGAGHEPRVDMTATRAPSLVRELSVRPRHLRVRLHLSSQPQDPGTGAALDLVDQRMLGGL
WASDLVPTVDGAPGGVGDRVPLLPAGAAHIARDLLDEALDRRGAIARMRASRRAVKSLLL
DQGIVSGVGNIYADEGLWGAGIHGLRPGRALGPRVSERLLESVAQVMRRALAVGGTSFDA
LYVDAEGAAGYFARELAVYGRAGLPCRRCQAPLRTEVVGGRSHTFCPRCQTRPRLMGEPR
RRASRS
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagctgccggaggtcgagtccgtccgtgcgggtctggccaggcacctgaccggg
cgcaccatcaccgccgtcgaggtgctcgaccccaggcccctgcgccgccaggatgggggt
ccgcaggccttctgcgaccagctgaccgggcggagcatcaccgcggcggtgcgccgcggc
aagttcctgtggctgcccctggatgatgggcgggcactgtcggcccacctgggcatgagc
ggccagctcctcgtgcgcggaaccggcgccccaggacccggccagggggctgcgcaggcg
ggcgatgagcgggtgggggaggggcccgccgtcggcggcggggcggatcccgatcccttc
ctgggggcggggcacgagccccgggtcgatatgacggccacccgcgccccgagcctggtg
cgcgagctgtcggtccgtcccaggcatctgcgcgtgcgcctgcacctgagctcccagccc
caggaccccggcaccggggcggccctggacctggtggaccagcgcatgctcggcggcctg
tgggccagcgacctggtccccaccgtggacggtgcgcccgggggagtgggggaccgggtg
ccgctgcttcccgcgggggccgcccatatcgcccgggacctgctcgatgaggccctggac
cgccgtggtgccatcgcccggatgcgggcctcgcggcgcgcggtcaagtccctgctgctg
gaccaggggatcgtctcgggcgtgggcaatatctacgccgatgagggcctgtggggcgcg
ggcatccacggcctgcgcccgggcagggcactgggcccgcgggtgagcgagcgcctcctg
gagtcggtcgcccaggtgatgcgccgggccctggcggtgggcgggaccagcttcgatgcc
ctgtacgtggatgctgagggggccgccgggtacttcgcccgcgagctggccgtctacggg
cgcgccggcctgccctgccgccgctgccaggcgccgctgcgcaccgaggtcgtcggcgga
cgctcccacaccttctgcccccgctgccagacccggccgcgcctgatgggggagccccgc
cgtcgtgcctcccgctcctga
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