Actinomyces capricornis: MANAM107_23560
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Entry
MANAM107_23560 CDS
T09393
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
acap
Actinomyces capricornis
Pathway
acap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MANAM107_23560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acap03019
]
MANAM107_23560
03009 Ribosome biogenesis [BR:
acap03009
]
MANAM107_23560
Enzymes [BR:
acap01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MANAM107_23560
Messenger RNA biogenesis [BR:
acap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MANAM107_23560
Ribosome biogenesis [BR:
acap03009
]
Prokaryotic type
rRNA helicases
MANAM107_23560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
adh_short
Motif
Other DBs
NCBI-ProteinID:
BDA65522
LinkDB
All DBs
Position
complement(2866016..2868454)
Genome browser
AA seq
812 aa
AA seq
DB search
MSTSNEPLSLDALFAAEASRGQDEVVPPPTAEPGAASSPDSPGSPQDFATPPSSETPGDP
EDVEHEDEEDDVERNLPEADPEGPEGSEQEDDGTEMDEEEVDGHAPFIDDEPAAPETGTG
IEDGGESPQESGTTFADLGLPADLLRAVTDMGYVTPTAIQKEAIPVLLAGRDVVGVAQTG
TGKTAAFGLPLLDAVDARDPEVQALVLAPTRELALQSAEAITDMASRSRGLDVVAVYGGA
PYGPQIGALKSGAQVVVGTPGRVIDLIDKGVLALDQVRYFVLDEADEMLRMGFADDVETI
AQSLPAERRTALFSATMPPAIQAVARQHLHEPVQVEVSRPSSTVATVHQTYAVVPFRHKI
GAVSRVLAVTDAQAAIVFVRTKSTAEDVAIELAGRGIQAAAISGDVPQRERERLVERLRA
GTLDVLVATDVAARGLDVDRIGLVVNFDVPREAEAYVHRIGRTGRAGRSGEAVTFLTPKE
KSKLRQIERLTGTRLEEITLPSPADVSEHRAAKLLSRAAARHERGRLGMYLPLVQATATD
LGIEAEDLAATLLALAVGDEGPQRRQDGEERRRPRREENLDSEGTFVSASFEGSRHDRKR
GERPEGKRGASRGGRREDEGPGTVYRVEVGHRDRVQPGAIVGALANEGGISGSDIGKIDI
LQSFSLVTIHTDLSPEQLDMMGRATFGGRELRIRPDQGPGHGWSGPQDRGERRAGPRRDG
ERGDRGERGGRWDRDERGGRRWQDRRERGDRGGRWDRDERGGRRWEDRGGRGGRDVRGGD
ARGGYRSGRDDRGSGRFGGNRGGGYRGNRDAR
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccagcaacgagcccttgagtcttgacgccctcttcgccgcggaggcctcccgc
gggcaggacgaggtcgtcccaccccccaccgccgagcccggagcggcctcctcgccggat
tcccccggctcaccccaggacttcgccactcccccctcctcggagacccccggcgatcct
gaggacgtcgagcacgaggacgaggaggacgacgtcgagcgcaaccttcccgaggccgac
cccgagggccccgagggcagcgagcaggaggacgacggcactgagatggatgaggaggag
gtcgacggccacgcccccttcatcgacgacgagcccgccgcccccgagacgggcaccggc
atcgaggacggcggcgagtcgccgcaggagtccggcaccactttcgccgacctcggcctg
cccgcggacctgctgcgcgccgtgaccgacatgggctacgtcacgcccaccgccatccag
aaggaggccatcccggtgctcctggccggtcgcgacgtcgtgggcgtggcccagaccggc
accggcaagaccgccgccttcggactgcccctgctcgacgccgtcgacgcccgcgacccc
gaggtccaggccctggtcctggcccccacccgcgagctggccctgcagagcgccgaggcg
atcaccgacatggcctcgcgctcacgcggcctggacgtggtggccgtctacggcggcgcc
ccctacggcccccagatcggcgcgctcaagagcggcgcccaggtcgtggtcggcacgccg
ggccgggtcatcgacctcatcgacaagggcgtcctggccctggaccaggtgcgctacttc
gtcctggacgaggccgacgagatgctgcgcatgggcttcgccgacgacgtggagaccatc
gcgcagtccctgcccgctgagcgccgcaccgccctgttctcggccacgatgccccccgcc
atccaggcggtggcacgccagcacctccacgagccggtccaggtcgaggtctcgcgaccc
tcctccaccgtggccacggtccaccagacctatgccgtggtgcccttccgccacaagatc
ggtgcggtctcccgcgtcctggcggtcaccgacgcccaggccgccattgtcttcgtgcgc
accaagtccaccgcggaggatgtggccatcgagctggccggccgcggcatccaggccgcc
gccatctccggggacgtgccccagcgcgagcgcgagcgcctggtcgagcgcctgcgcgcc
ggcaccctggacgtcctggtggccaccgatgtggccgcgcgaggcctggatgtggaccgc
atcggcctggtggtcaacttcgacgtgccgcgggaggccgaggcctacgtccaccgcatc
gggcgcaccggcagggccgggcgcagcggtgaggccgtgaccttcctgacccccaaggag
aagagcaagctccgccagatcgagcgcctcaccggcacccgcctggaggagatcaccctg
ccctcccccgccgacgtctcggagcaccgcgccgccaagctcctgagccgcgccgccgcc
cgccacgagcgcggcaggctgggcatgtacctgcccctggtgcaggccaccgccacggac
ctgggcattgaggccgaggatctcgcggccacgctcctggccctggcggtgggcgatgag
ggcccccagcgccgtcaggacggtgaggagcgccggcgccctcgccgcgaggagaacctg
gactccgagggcaccttcgtctcggcgtccttcgagggcagccgtcatgaccgcaagcgc
ggcgagcgccccgagggcaagcgcggggcctcgcgcggcgggcgacgtgaggacgagggg
cctggcaccgtctaccgggtcgaggtcggccaccgcgaccgcgtccagcccggggcgatc
gtgggcgccctggccaatgagggcggcatcagcggctcggatatcggcaagatcgacatc
ctccagtccttctccctggtgaccatccacaccgatctgagccccgagcagctcgacatg
atgggtcgggcgaccttcggcggccgcgagctgcgcatccgccccgaccagggtcccggg
cacggctggtccggcccccaggaccgtggcgagcgccgcgcggggccccgccgcgacggc
gagcgcggggaccgcggtgagcgcggcggacgctgggaccgggacgagcgcggcggacgc
cgctggcaggaccggcgcgagcgcggggaccgcggcgggcgctgggaccgggatgagcgc
ggcggacgccgctgggaggaccggggcggacgcggtggacgcgacgtccgcggcggcgac
gcccggggcgggtaccgctcgggacgcgacgaccgcggctcgggccgcttcggcggcaac
cgcggcggcggctaccgcggcaaccgcgacgcccgctga
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