Acinetobacter sp. ASP199: IHE35_05520
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Entry
IHE35_05520 CDS
T11534
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
acaq Acinetobacter sp. ASP199
Brite
KEGG Orthology (KO) [BR:
acaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acaq03021
]
IHE35_05520 (rapA)
Transcription machinery [BR:
acaq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IHE35_05520 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UNT60263
LinkDB
All DBs
Position
1184853..1187690
Genome browser
AA seq
945 aa
AA seq
DB search
MEKLQQFAIGQRWLSDTETELGLGVLIDVDERSVSILFPKSDETRVYARSNAPLSRIIFN
INDELQDQEGNTWTVESFEDRNGVVRYQVVRTLSDGTEERKALNETRVGATIQLSKPLDR
LLASQIDYKEWYDLRIEAMLMQANMQSSPLRGLVGSRVGLIPHQLYIAHEVGKRFAPRVL
LADEVGLGKTIEAGLIIHQQLKTGRSERILILVPDSLQYQWMIEMRRRFNLEFSLFDLTR
TASIKEHDPDLNPFLTEQRIIASVDLMIDHEDLREQALEAGFDLLVVDEAHHLMWSEEEG
GNDRYDLVEELSEKTPGVLLLTATPEQLGVESHFARLRLLDPQRFSSLDRFLDEEAQYQQ
TAKIAEVLMSDMPLEEGHLAALEGLLGHRIEDTPEQRFRAIHELLDRHGTGRILFRNTRE
AIQGFPGRDCQPAPLPAPENWSMDGKLREQMWPEEMQLDGSWMETDPRVMWLMEKLRTEL
KHKKVLLIARSGPVVEALENALRLHAGIRTAMFHEGMSLLERDQAAAYFAEDSYGAQILL
CSEIGSEGRNFQFASDLVLFDLPANPDVLEQRIGRLDRIGQENRIQIHVPYLVGTAQERM
FRWYNEALNIFSNISPTAQTLQENFIVDLKDCLLADKGQAFEELLEAVSVQREALEAELQ
AGRDRLLEYNSCRPIVAQEIVTALEDYDDNTTLPMFMKRFMASTNIDFDEQSNGTVIIKP
TDQMQVQGLTLDEEGMTATFYRDQAQIREDAQYLTLEHPFTESVMEMINTQGFGSTNVAV
LKSAALPQGSVLLEVWFKVDVVAPKALNLPASLPQQLVRVLLSEKGQDLSQKIARDILKP
YLHHLDGNSCRQVVKARRDVIEARYKQALELARAALPQFKEQAKEVYGSKWQYEIDRLTY
LKQFNPSIREDEITRLQKLQKEGLSLLEGLSVTPEAIQVMVVVKP
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaattgcagcagtttgctattggtcaacgttggttatcagatactgaaacagaa
ctcggtctgggggttctcattgatgttgatgagcgatcggtcagcattttattcccgaaa
agtgatgaaacccgtgtctatgcacgtagcaatgcccctttgtctcgcatcatttttaat
ataaatgatgaactgcaagaccaggaaggcaatacctggacggttgaatcttttgaagat
cgcaacggcgtggtgcgttatcaggtggtacgtactttaagtgatggtacagaagagcgt
aaagccctgaatgaaacccgtgtcggtgcaaccattcagttgtctaagccattagaccgt
ttgctggctagccagattgattataaagaatggtatgacttgcgtattgaagctatgctc
atgcaagccaatatgcaaagcagcccgctacgtggtctggtcggttcacgtgttggtctg
attccgcatcagttgtatatcgcacacgaagtcggtaaacgttttgcaccgcgtgtattg
cttgccgatgaagtgggtttgggtaaaaccattgaagctggcttgattattcaccaacag
ctgaaaactggccgttctgaacgtattctgattctggtgccagattcactacaatatcag
tggatgattgaaatgcgccgtcgtttcaatctggaattttcactgtttgatctgacccgt
actgcatcaatcaaagaacacgatcctgatctgaacccattcctgactgaacaacgcatt
attgcttcggttgacctgatgattgaccacgaagacctgcgtgagcaggcacttgaagct
ggtttcgatctgctggttgtcgatgaagcgcatcatctgatgtggagtgaagaagagggt
ggtaacgaccgttacgatctggttgaagaactatctgaaaaaacaccgggcgtattactg
ttaactgcaacacctgaacagctgggtgtggaatcgcactttgcgcgtttacgtttactg
gatccacaacgtttcagttcattagaccgtttcctggatgaagaagcacaatatcagcag
actgcaaaaattgcagaagtgctgatgtcggatatgccacttgaagaagggcatctggca
gcacttgaaggcctgctgggtcatcgtattgaagatactcctgagcagcgtttccgtgcg
attcatgaattgttagaccgtcatggtactggccgtattctgttccgtaatacccgtgaa
gccattcagggcttcccgggacgtgactgccagccagcaccattgccagcacctgaaaac
tggtcaatggatggtaaattgcgtgagcaaatgtggccagaagaaatgcagcttgatggc
tcgtggatggaaactgatccacgtgtgatgtggctgatggaaaaactgcgtactgagtta
aaacacaaaaaagtgttattgattgcgcgtagtggtccagtggttgaagcgcttgaaaat
gcactgcgtctacatgcaggcattcgtactgcgatgttccatgaaggcatgagcttactt
gaacgtgaccaagcagctgcatattttgctgaagattcgtatggcgcgcagattttgttg
tgttctgaaattggttctgaaggtcgtaacttccagtttgcatcagacctcgtgttattc
gacttgccggcaaacccagatgtactcgagcaacgtattggtcgtttagaccgtattggt
caagaaaaccgcattcaaattcatgtgccttaccttgtcgggactgcacaagagcgcatg
ttccgttggtataacgaagcattaaatattttcagcaatatttcaccaacggcgcaaacc
ttacaagaaaacttcattgttgatcttaaagactgtttattagcagacaaaggtcaggct
tttgaagaattgctggaagctgtgagcgtacaacgtgaagccttagaagctgagctacaa
gcgggtcgtgaccgtttgcttgagtacaactcttgccgtccaattgtggcacaagaaatt
gtgactgcacttgaagactatgatgacaacaccacgttgccaatgtttatgaagcgcttt
atggcgtcaaccaacattgattttgatgagcaaagtaacggtacagtgatcattaagcca
accgatcaaatgcaagtgcaaggtttgacgcttgatgaagaaggtatgacggcaacgttc
tatcgtgatcaagcccaaatccgtgaagatgcacagtatttaacccttgagcatccattt
acagaatctgtaatggaaatgatcaatacccaaggttttggtagtaccaacgttgccgtt
ttaaaatctgctgctttaccacaaggttcagtattgctagaagtgtggtttaaggtcgat
gtggttgcaccaaaagcattgaacttgcctgcaagcttgccgcaacaattggttcgtgtg
ttactgagtgaaaaaggtcaggatctatcgcaaaaaattgcacgtgatattttaaaaccg
tatttacatcatctagatggcaacagctgccgccaagtggtgaaagcacgccgtgatgtg
attgaagcacgttataagcaagcgctagaactggcgcgtgctgctttgccgcaattcaag
gaacaagcgaaggaagtgtatggtagcaaatggcaatatgaaattgaccgtctgacttac
ctgaaacagttcaacccaagcatccgtgaagatgaaatcacgcgtctgcaaaaactgcag
aaagaaggtttaagcttattggaaggtctgtctgtgacaccagaagcgattcaggtgatg
gtagtggttaagccataa
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