Acinetobacter sp. ASP199: IHE35_05780
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Entry
IHE35_05780 CDS
T11534
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acaq Acinetobacter sp. ASP199
Pathway
acaq03030
DNA replication
acaq03430
Mismatch repair
acaq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IHE35_05780 (dnaE)
03430 Mismatch repair
IHE35_05780 (dnaE)
03440 Homologous recombination
IHE35_05780 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acaq03032
]
IHE35_05780 (dnaE)
03400 DNA repair and recombination proteins [BR:
acaq03400
]
IHE35_05780 (dnaE)
Enzymes [BR:
acaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IHE35_05780 (dnaE)
DNA replication proteins [BR:
acaq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IHE35_05780 (dnaE)
DNA repair and recombination proteins [BR:
acaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IHE35_05780 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
DALR_1
Motif
Other DBs
NCBI-ProteinID:
UNT60314
LinkDB
All DBs
Position
complement(1244658..1248230)
Genome browser
AA seq
1190 aa
AA seq
DB search
MHFVHLGIHTEFSITESIVRIPDLVKAAANDEMPALALTDLSNLHAAVKFYKKCLDKGIK
PILGSEIRLNDAEHRVTLLSMTNKGWRNLTELVSEGYISGQQLDIPCVQKDWILKQHDDM
IILLGMQSDVGKMLITSNPDKAEPLLQEWVEKFGNRVYLALTRTSRPNEDLFIEEAVKLA
KKYNIGVVAHNDVHFIAREDFEAHEARVCIADGYVLGDNRRPKTYSPEQYFKSSTEMAEL
FSDIPTAIENTFHIARRCNVTLRLGFNDLPDYPIPEGHTIGSYFTHLCEVGLEERLDFLY
PPEKRGEDWPEIRQPYDERLAFEIKIILDMGFPGYFLIVMDFIQWSKGNGVPVGPGRGSG
AGSLVAYSLKITDLDPLRYDLLFERFLNPERVSMPDFDVDFCIAGRDRVIDYVARTYGRD
AVSQIATFGTMAAKGAIRDVARVLGKSYGLADRISKLIPTKPLGLSLEESLEAEPQLKDV
VTNPSNPDYDDASEIWEMALKLEGITRNTGKHAGGVVIAPTKLTDYSAVMCDADGTARVA
QFDKDDVEAAGLVKFDFLGLRNLTVIEDAVKNINKRIQSDKPLDIAYIPLDDKDAYLVFA
EANTTAVFQFESVGMKKMLKEARPSKFEEIIAFVSLYRPGPMDLIPDFIHRMHGGEFEYL
HPLLEGVLEPTYGIMVYQEQVMQAAQFCAGYTLGGADLLRRAMGKKKPEEMVKQRKIFIE
GAAKKDIDEATANHIFDYMEKFAGYGFNKSHAAAYALVAYQTAWLKAHYPAEFLAAVMSS
EMQNTDNVVFLIDDCRKNNLEVLPPSVNMSIYQFHATDEKTIVYGLGAIKGVGEAAMQSV
IESRQKEGPYKDLFDFCHRIDLKKINKRTLEALIRAGALDCLGIERADLMAQLPEAVQAA
DQARQNRETGIMDLFGEVEEVQRKPAKPVKPWSDEVRLKGEKDTLGLYLTGHPIDVYRNE
LKAFVPCQINELTPTRRGVTTVFAGLVVDVANFPNRMMVTLDDGTARIEISTNHERFQRF
KDIVQVDKVVVIEGEIYEREGFDRPMGRLTKAFSLNEIRQKRANSIKITLQAEHYSKTLS
RDLQQILMPYTNVDMSTHIPVILYLDYGYATAELHLGLNWKVAPLDELLAKLRDYFGKAA
LHIEYQVKSKAARAVSYEEAKPVEVPPPPADMSMDDAMAQYEAESQPQYS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcactttgttcatcttggtattcatacagaattttcgattactgaatccatcgtacgg
ataccggacctggtcaaagctgctgctaatgacgagatgccagcactcgcgctgactgat
ttatctaatctacatgccgcagtcaaattctataaaaaatgcctggataaaggcattaaa
ccgattctcggttctgaaatccgtctgaatgatgccgaacatcgtgtcaccctgctttcc
atgaccaacaaaggctggcgcaacctgaccgaactggtttctgaaggttatattagtggc
cagcagctcgatattccttgcgtacagaaagattggatcttaaagcagcacgatgacatg
atcatattgctgggtatgcaatccgatgtcggcaaaatgctgattacctcaaatcccgat
aaagctgaacctttactacaggaatgggtagaaaaatttggtaatcgcgtatatttagcg
cttactcgtacaagtcgtccgaatgaagaccttttcattgaagaagcggtcaaactcgcc
aaaaaatataatatcggtgtagtcgcacataatgacgtgcactttattgcacgtgaagat
tttgaagcacacgaagcacgtgtctgtattgccgatggttatgtacttggtgataatcgc
cgccctaaaacctatagtcctgaacagtactttaaaagctcaacagaaatggcagagctt
ttctcggatattccaaccgcaattgaaaacacctttcatatcgcaagacgttgtaatgtt
accttgcgactgggctttaatgacctgccggactatccgattccagaaggtcataccatt
ggcagttatttcacccatttgtgtgaagtcggtctggaagaacgcctagactttctgtat
ccacctgaaaaacgtggtgaggactggccggaaatccgtcagccttatgatgaacgtctg
gcttttgaaatcaaaattattctggacatgggcttcccgggttacttcctgatcgtaatg
gacttcattcaatggtccaaaggtaatggggtgccggtaggtccgggtcgtggttcgggt
gccggttctctagtagcctatagtttaaaaattactgaccttgatccactgcgttatgac
ctgctattcgaacgtttcttaaacccggaacgtgtttcgatgcccgactttgacgtcgat
ttctgtattgccggtcgtgaccgcgtgattgattatgtggcgcgtacttatggccgggat
gcagtttcccagattgcaaccttcggtaccatggcggccaaaggtgcaattcgtgacgtg
gcacgtgtcctgggtaaatcctatggtcttgccgatcgtatttccaaactgattccaacc
aagcctttgggcttaagcctggaagaatctctggaagccgaaccgcaactaaaagatgtg
gtcaccaatccatccaacccggattatgacgatgcttctgaaatctgggaaatggcactg
aagcttgaaggtattacccggaataccggtaaacatgccggtggcgtggtgattgcgcca
accaagctgaccgactactcagccgtgatgtgtgatgctgatggtacagcacgggttgcc
cagttcgataaggacgatgtcgaagctgccggtttggtgaagttcgacttcctaggtcta
cgtaacctgaccgtaattgaagatgcggttaaaaatatcaataagcgaatccagagcgat
aaaccgctggatattgcttacatccccttagatgacaaagatgcctatctggtctttgct
gaagccaataccacagcggtcttccagtttgaatccgtgggcatgaaaaagatgctgaaa
gaggcacgcccaagtaaatttgaagagattattgctttcgtatcattataccgtccgggt
ccaatggatctaattcctgactttattcatcgtatgcacggcggtgagtttgaatatctg
catcctctgctagaaggcgtattagagccaacttacgggattatggtctatcaggaacag
gtcatgcaggctgcgcagttctgtgccggctatacccttggcggcgcggacttgctgcgt
cgtgcgatgggtaagaaaaagcctgaggaaatggtcaagcagcgtaagatcttcattgaa
ggtgctgcgaaaaaagatattgatgaagctactgctaaccatatcttcgactatatggaa
aaattcgctggttatggttttaacaaatcgcatgcagccgcttacgcacttgttgcctac
cagacagcctggctgaaagcacattatccggctgagttcctggcagcggtgatgtcttcg
gaaatgcagaatacagataacgtagtattcctgattgatgactgccgcaagaacaatctg
gaagtgttaccaccgtcagtcaatatgtcgatttatcagttccatgctactgatgaaaaa
accattgtctatggtttgggagcaatcaaaggcgtgggtgaagcggccatgcagtcggtg
atcgaatcacgtcagaaagaaggtccatataaagacctgtttgacttctgtcaccgtatc
gacctgaagaaaatcaacaaacgtacgctcgaagccttgatccgtgctggtgcactggat
tgcttgggcattgaacgcgctgatttaatggcacagcttcctgaagcagtacaggctgca
gatcaggcccgtcagaaccgtgaaaccgggatcatggatctatttggtgaagttgaagaa
gttcagcgtaaaccggccaaaccggtgaaaccttggtctgatgaagttcgtctcaaaggt
gaaaaagatacactcggcctatatctaacgggtcacccaattgatgtatatcgtaatgag
ctaaaagcattcgtaccttgtcagatcaatgaattaaccccgacccgtcgtggtgtaacg
actgtgtttgctggtctggtagtcgatgtcgctaacttcccgaaccggatgatggtgaca
ttagatgatggtacggcacgtatcgaaatctccaccaaccatgaacgcttccagcgcttt
aaagacatcgttcaggtggataaagtcgtggtgattgaaggtgaaatttacgagcgtgaa
ggttttgatcgcccgatgggacgtttgaccaaagcctttagcctgaacgaaatccgtcag
aaacgtgctaacagcatcaagattaccttgcaagctgaacattacagcaaaaccctcagc
cgtgacttgcagcaaattctgatgccatataccaatgtggatatgagcacgcatattcca
gtgattctgtatctggattatggctatgccacagccgagctgcatctgggcctaaactgg
aaagttgcgccgctagatgagctgctcgccaagttgcgtgactattttggtaaagctgcc
ttgcatattgaataccaggttaaatctaaagccgcccgcgcggtatcttatgaagaagcc
aagccggttgaagtgccacctcctcctgcagatatgagtatggatgatgccatggcacag
tatgaagccgagtctcagccgcaatattcataa
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