Acinetobacter sp. ASP199: IHE35_12570
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Entry
IHE35_12570 CDS
T11534
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acaq Acinetobacter sp. ASP199
Pathway
acaq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acaq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IHE35_12570 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acaq03021
]
IHE35_12570 (rpoA)
03400 DNA repair and recombination proteins [BR:
acaq03400
]
IHE35_12570 (rpoA)
Enzymes [BR:
acaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IHE35_12570 (rpoA)
Transcription machinery [BR:
acaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IHE35_12570 (rpoA)
DNA repair and recombination proteins [BR:
acaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IHE35_12570 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
UNT58898
LinkDB
All DBs
Position
complement(2634910..2635917)
Genome browser
AA seq
335 aa
AA seq
DB search
MTRTANEFLTPQAIKVEAASGTSAKVILEPLERGFGHTLGNALRRILLSSLPGAAVVEVE
IEGVEHEYSTLEGLQQDIVELLLNLKGLSIKLFDQNEAYLTLEKQGPGDVTAADLRLPHN
VEVVNPEHLIGTLSASGNLKMRLKVAQGRGYETSDSRFPEGETRPVGRLQLDASYSPIKR
VSYTVENARVEQRTDLDKLIIDLETNGTVDPEEAIRKAATILQQQIAIFVDLQKDQAPVA
QEPREEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASKGLQLGMRLENWPPASLRMDDRFAYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtactgcaaatgagtttctaactccgcaagcgatcaaggtcgaagcggcaagc
gggacctcggcaaaagttattctagaacccttagagcgtggctttggtcatactctgggc
aatgctttacgtcgcatccttctttcttctttacctggcgctgctgtggtagaagtagaa
attgagggtgttgagcacgagtacagtactttggaaggcttgcagcaggacatcgtcgag
ctcttgctgaacctaaaaggattgtctattaagctgttcgatcaaaatgaagcttattta
acattagagaaacaaggtccaggcgacgtaactgcggctgaccttcgtttacctcataat
gttgaagtggttaaccctgaacacttgatcggcacgttaagtgcttcaggcaatcttaag
atgcgcctgaaagtggctcaaggccgtggctacgagacttctgactcacgtttcccagaa
ggcgagactcgcccagtgggtcgtttacagttagatgcatcttacagcccgatcaaacgt
gtgtcttacacagttgaaaatgctcgtgtagaacaacgtactgaccttgataaactgatc
attgatcttgaaaccaacggtacagttgatcctgaagaagcaatccgcaaagcggcaaca
atcttgcaacaacaaattgcaatctttgttgaccttcagaaagatcaagctccagttgct
caagaacctcgtgaagaagttgatccgattttgcttcgtccagtagatgatctagagcta
actgttcgttctgctaactgtttgaaagcagaaaacatttactacattggtgatcttgta
cagcgtactgaagttgagttacttaaaactcctaacttgggtaaaaaatcgcttactgag
atcaaagatgttctggcttctaaaggcttacaactcggcatgcgtttagagaactggcca
ccagctagtctccgtatggacgatcgtttcgcctatcgtagccgttaa
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