Antrostomus carolinensis (chuck-will's-widow): 104517507
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Entry
104517507 CDS
T08541
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Pathway
acar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104517507 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acar03021
]
104517507 (SF3B3)
03041 Spliceosome [BR:
acar03041
]
104517507 (SF3B3)
03036 Chromosome and associated proteins [BR:
acar03036
]
104517507 (SF3B3)
Transcription machinery [BR:
acar03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104517507 (SF3B3)
Spliceosome [BR:
acar03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
104517507 (SF3B3)
Complex B
104517507 (SF3B3)
Complex C
U2 SnRNP specific factors
104517507 (SF3B3)
Chromosome and associated proteins [BR:
acar03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
104517507 (SF3B3)
TFTC complex
104517507 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_RSE1_1st
Motif
Other DBs
NCBI-GeneID:
104517507
NCBI-ProteinID:
XP_010173353
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
AIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENPMFACLEMDYEEAD
NDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPGGSDGPSGVLICSE
NYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFFFLAQTEQGDIFKI
TLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQIAHLGDDDEEPEF
SSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILCCQIADLANEDTPQLYVACGRGPRS
SLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEFDAYIIVSFVNATLVLSIGETVEE
VTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPGKKTIVKCAVNQRQ
VVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQRSRFLAVGLVDNT
VRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSIGFLYLNIGLQNGV
LLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSWLSYSYQSRFHLTP
LSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFPLQYTPRKFVIHPE
SNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAAAFLNENLPESIFG
APKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTGDDWYVLVGVAKDL
ILNPRSVAGGFVYTYKLVNSGEKLEFLHKTPVEEVPAAIAPFQGRVLIGVGKLLRVYDLG
KKKLLRKCENKHIANYICGIQTIGHRVIVSDVQESFIWVRYKRNENQLIIFADDTYPRWV
TTATLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRGLLNGASQKAEVIM
NYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHE
NT seq
3011 nt
NT seq
+upstream
nt +downstream
nt
gtgctattgaaaagcagaagctggtgtatatcttgaacagagatgctgctgctcgtctga
ccatctcctccccgctggaagcccacaaggccaataccttggtctaccacgtggtgggag
ttgatgtgggatttgaaaacccgatgtttgcttgtctggaaatggattacgaggaagcag
acaacgatcccacaggagaagcagcagccaacacacaacagaccttgacgttttatgaac
tggacttgggtttgaaccatgttgtgaggaaatacagtgagcccttggaagagcacggca
acttccttataacagttcctggtggttctgatggaccaagcggggtgctgatctgttctg
aaaactatattacttataaaaacttcggtgaccagcctgatatcagatgcccaattccca
ggagacggaatgacttggatgacccagagagaggtatgatttttgtctgctctgctacac
ataagaccaagtccatgttcttcttcctggcccagacagagcagggagacatcttcaaaa
ttactctggagacagatgaagacatggtaaccgagattcgactcaagtactttgatactg
ttcctgttgctgctgccatgtgtgtgctgaaaaccgggttcctctttgtggcatccgaat
tcggaaaccattatctgtaccagatagctcacctgggtgacgatgatgaggagccagagt
tttcttctgccatgcctcttgaggaaggagatacattcttttttcagccacgacctctca
agaacctggtgctggtggatgagttggacagtttgtctcctattctgtgttgtcagatag
cggatttggccaatgaagacacaccccagttgtatgtggcttgtggtcgggggccccggt
cgtctctgagggttctaagacatggacttgaggtgtctgaaatggctgtctcggagctgc
ctggtaaccccaacgctgtatggaccgtgaggagacacgttgaagatgagtttgatgcct
atatcattgtgtccttcgtaaatgccacgctggtgctgtctatcggagagactgtagaag
aagtgactgactctggattcctgggtactacacccaccctgtcctgctctcttcttggtg
atgatgctttggtacaggtttatccagatgggatccgacacatccgagcagataagagag
taaatgaatggaagacaccggggaagaaaaccattgtaaaatgtgctgtgaaccagagac
aagtggtgatagcactgactggaggagaactggtttacttcgagatggacccgtcaggac
agctgaatgagtacacggagagaaaggagatgtcggccgacgtcgtgtgcatgagcctgg
ccaacgtcccccctggggagcagcgctcccggttccttgctgttgggctggtggacaaca
ctgtcagaattatttcccttgacccttcggattgcttacagccgctgagtatgcaggccc
tgcctgcacagcccgagtctctctgtattgtggagatgggtggcacagagaagcaggacg
agctgggggagagaggctccatcggctttctgtacctgaacattggactgcagaatggtg
tgctgctgcgaactgtcctggaccccgttacgggcgatctttccgataccaggaccaggt
accttggctcacggcctgtgaaactcttccgagtccgaatgcaaggccaagaggcggtgc
tggccatgtccagccgctcctggctcagttattcctatcagtcacgcttccacctgactc
ccctgtcttatgagacactagagtttgcgtctggttttgcttctgagcagtgcccagagg
gcatcgttgccatctccacaaacacactgaggattttggcactggagaagctgggagcag
tcttcaaccaggttgccttcccgttgcagtacacaccccgaaaatttgtcattcacccag
agagcaacaacctgatcatcattgagacagaccacaacgcttacactgaggccaccaagg
cacagaggaagcagcaaatggccgaggaaatggtggaggctgcgggtgaagatgagaggg
aattggctgcagagatggctgcagcctttctgaatgagaatcttcccgagtccatctttg
gtgctcccaaggcagggaatggacagtgggcctctgttatcagggtgatgaaccccattc
agggaaatacattagatctggtccagctagagcagaacgaagctgccttcagtgtggctg
tgtgccgcttctccaatactggtgatgactggtacgtgctggtgggagtcgccaaggacc
tgattctgaacccacgctcggttgctgggggatttgtctacacgtacaagctggtgaata
gcggtgagaagctggagttcctgcacaagacccccgtggaggaggttcctgcagccattg
ctccgttccagggtagagtcttaattggagtcggaaagctcttgcgtgtatatgacctgg
gcaagaagaaactgcttcggaagtgtgagaataagcacattgccaactacatctgtggga
tccaaaccattgggcacagagtgattgtttcagacgttcaggagagtttcatctgggtgc
gctacaaaaggaatgagaaccagctcatcatctttgctgatgacacttatccccggtggg
tcactacagcaactctcctggattatgacactgtggctggagcagacaagtttggcaaca
tctgcgtggtgagattgcctcccaacaccaacgatgaggtagatgaggatcccacaggca
acaaagcgctgtgggacaggggacttcttaatggagcgtcgcagaaggctgaagtgatta
tgaattaccatgtgggagagacggtgctttccttacagaagaccacgctgatcccaggag
gctccgaatctcttgtctacaccaccttatcgggggggataggaatcttggtccctttca
cttcccacgag
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