Antrostomus carolinensis (chuck-will's-widow): 104517605
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Entry
104517605 CDS
T08541
Symbol
NPHP3
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
acar
Antrostomus carolinensis (chuck-will's-widow)
Brite
KEGG Orthology (KO) [BR:
acar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
acar03037
]
104517605 (NPHP3)
Cilium and associated proteins [BR:
acar03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
104517605 (NPHP3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_NPHP3
NPHP3_hel
NPHP3
TPR_12
TPR_10
NPHP3_N
TPR_8
NACHT
TPR_MalT
AAA_16
KAP_NTPase
TPR_1
AAA_22
AAA_19
AAA_14
ATPase_2
T2SSE
Viral_helicase1
Motif
Other DBs
NCBI-GeneID:
104517605
NCBI-ProteinID:
XP_010168645
LinkDB
All DBs
Position
Unknown
AA seq
976 aa
AA seq
DB search
ERLKKEYEIFRVSKNNEVASMVKKEAKLDRENKRLRAELQALQKTYQKILREKESALEAK
YQAMERAATFEHDRDKVKRQFKIFRETKENEIQDLLRAKRELEAKLQRLQAQGIQVFDPE
ESDSDDNCTDVTATGAQSEYWNGGALGSEPSMGSLMQLQQSFRGPEFAHSSIDVEGPFAN
INRDDWDAAVASLLQVTPLFSHSLWSNTVRCFIISTDETLPEVDIFISNYSPKLQRICET
MGYFFQVVHFSAENERPVKDVRKWEIEKSSLVILLLHLTLPSCLLEDCEEAFLRNPEEKP
RLIYHRKEEGRISSASVQQLIEQISCMNKAKMIDHVGGVEEGAYEIYNCVEKIIKQDLLG
CEMTELEGKDLGNKEESTAPEEEVFGDVLWDAHDEQEQMEAFQQASNSTCELGFEKYFER
LNDLVAAPAPIPPLLVSGGPGSGKSLLLSKWIQLQQKHSPNTLILYHFVGRPMSASSESA
LVIKRLTLKLMQHSWLMSPLTLDPAKLLEEFPRWLEKLSARHQGSIIIIIDSIDQIQQAE
KHMKWLIDPLPVNVRVIVSVNVETCPQAWRLWPTLHLDPLNSKDVKSLISAECDCANVKL
TKEQEKKLERHCRSATTCNALYVTLLGKTIACVGSTGNIDEILQQCFQCQDTVSLYRLVL
RSVQESLRSDKEKSLLKEILCVISVSHNGVSESELMELYPELSSTVLASLIHSLHKMCLL
TYGCGLLKFQHLQAWEMVRLEYMEEGENVISAYRQKLVEYFTRQLSRDRVTWRSADELPW
LFQQQGDKQKLHKCLLNLFVSQNLYKRGHFAELLSYWQLVGKDKSSMAAEYFDSLKEYEK
SCEGEESMICLADLYETLGRFLKDLGLLSQAVAPLQRSLEIRETALDPDHPRVAQSLHQL
AGVYVQWKKFGNAEQLYKQALEISENAYGSEHPRVARELDALATLYQKQNKYEQTEQLRK
KSFKIRQKAARRKGSL
NT seq
2928 nt
NT seq
+upstream
nt +downstream
nt
gagcgcctgaagaaggagtacgagatcttccgcgtcagcaagaacaacgaggtggcctcc
atggtgaagaaggaggccaaactggacagggagaacaagcggctgcgcgccgaactgcag
gcacttcagaaaacttaccagaaaatacttagagagaaagaaagtgcattagaagctaaa
taccaagccatggagagagctgctacttttgaacatgatcgagacaaagttaaaaggcaa
ttcaagatttttagggaaactaaagaaaatgagattcaggacttgctgagggctaaacga
gagctagaagctaaacttcagagactccaggcccaaggaatccaagtgtttgatcctgaa
gagtctgattctgatgacaattgtacagatgttacggctactggggcacagtctgaatac
tggaatggaggagctttgggaagtgagccgtccatgggtagtctgatgcagcttcagcag
tctttcagagggcctgaatttgctcatagctctatagatgttgagggaccatttgcaaat
ataaacagagatgattgggatgctgctgtcgccagtttactacaggttactcctctgttt
tcccactctctgtggagtaacacagtaaggtgttttattattagtactgatgagactcta
ccagaagtggacatcttcattagtaactactcaccaaaacttcaaagaatctgtgaaaca
atggggtatttctttcaagttgttcatttttcagcagaaaatgaaaggcctgttaaggat
gtaagaaagtgggaaattgaaaaaagttcattagtcattttgctcctgcatttaactttg
ccaagttgtttgttggaggactgtgaagaagccttcttgagaaatccagaagaaaaaccc
cggctaatttaccacagaaaggaggagggcagaatcagttcagcttcagtgcaacagtta
attgagcagatttcttgcatgaacaaagcaaagatgattgatcatgtcggaggtgtggag
gaaggagcatatgagatctataactgtgtggaaaagataattaaacaggatttattgggc
tgtgaaatgacagaactagaaggcaaggatttgggtaataaggaagagtccactgctcct
gaagaagaagtttttggtgatgttttgtgggatgcgcatgacgaacaagaacagatggaa
gcttttcagcaggcttctaattcaacatgtgagctgggatttgagaagtattttgaacgt
ctaaatgacctagtagcagcaccagcaccaattccacctctgcttgtatcaggaggacca
ggctctggaaaatctctccttctgtcaaaatggattcaattgcaacagaaacattcacca
aacactctaattctttatcactttgttgggaggcccatgtctgctagttcggaatctgca
ttggtaattaaacgccttactttaaagcttatgcaacactcatggttaatgtcacctctg
accttggatccagctaaacttctggaagagtttccccgctggctggaaaagctttctgca
cgtcatcaaggcagcattattataattattgattctattgaccaaatacagcaagctgag
aagcatatgaaatggctgatagatccactgccagtgaacgtgagagtgattgtatcagtg
aatgtagaaacatgtccacaagcttggaggttgtggcccactcttcatcttgatccactg
aattccaaagatgttaaatctctcattagtgcagaatgtgactgtgcaaatgttaaatta
actaaagagcaggagaagaagcttgagagacattgtcgttctgccacaacttgcaatgct
ttgtatgtcactctcttgggcaaaaccattgcttgtgttggaagtacaggaaatattgat
gaaatacttcaacagtgtttccaatgtcaagacacagtgtcactgtacaggcttgttctg
agatcagttcaagagtcattgcggagtgataaagagaaaagtcttttgaaagagatactg
tgtgtcatcagtgttagccacaatggtgtgagtgagtcagaactgatggaactttatcct
gaactgtcttccacagtgttagcctcgcttattcacagcctgcacaaaatgtgtttgctg
acatacggctgtggtctgctaaagttccagcacctccaggcttgggagatggtgagacta
gagtatatggaagaaggtgaaaatgttatttctgcctataggcaaaaactagtggaatat
ttcaccaggcagctaagtcgagaccgagtgacttggagaagtgcagatgaacttccctgg
ctcttccaacagcagggcgataagcaaaagctacacaagtgtcttctgaatctctttgta
tcccaaaacctttacaaaaggggacattttgcagaattgctgagttactggcagctggtt
gggaaagataagagctctatggcagctgagtattttgactctctgaaagaatatgaaaaa
agctgtgagggagaggaaagtatgatctgcctggctgatctttatgagaccctgggacgg
tttcttaaggacctaggtcttctcagtcaggctgtagctcctctgcagcggtctctggag
attcgagagactgctctggatccagaccacccgagggtggcgcagtcactccaccagcta
gcaggagtttatgttcagtggaagaagtttggaaatgctgaacagttgtataaacaggca
ctggaaatttctgaaaatgcttatggatctgaacatcctcgagtagcccgtgaacttgat
gcacttgcaaccttatatcaaaagcagaacaaatacgaacaaactgagcaactgaggaaa
aagtctttcaaaatacggcaaaaagcggcaaggcggaaaggcagtctg
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